Genomic Map
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Target Gene Details
Entrez Gene ID: | 6249 |
Gene Name: | CAP-Gly domain containing linker protein 1 |
Gene Aliases: |
CLIP, CLIP-170, CLIP170, CYLN1, RSN |
Location: |
Chr.12:122271432-122422956 on Build GRCh38 |
Assay Gene Location: | Within Exon 30 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CLIP1 | NM_001247997.1 | 26 | 5349 | NP_001234926.1 |
| NM_002956.2 | 25 | 5316 | NP_002947.1 | |
| NM_198240.1 | 24 | 5211 | NP_937883.1 | |
| XM_005253593.2 | 27 | 5418 | XP_005253650.1 | |
| XM_006719552.3 | 26 | 5411 | XP_006719615.1 | |
| XM_017019786.1 | 25 | 5480 | XP_016875275.1 | |
| XM_017019787.1 | 26 | 5301 | XP_016875276.1 | |
| XM_017019788.1 | 25 | 5306 | XP_016875277.1 | |
| XM_017019789.1 | 25 | 5465 | XP_016875278.1 | |
| XM_017019790.1 | 24 | 5201 | XP_016875279.1 | |
| XM_017019791.1 | 25 | 5294 | XP_016875280.1 | |
| XM_017019792.1 | 24 | 5189 | XP_016875281.1 | |
| AB209115.1 | 22 | 4075 | BAD92352.1 | |
| AK126990.1 | 16 | 3005 | ||
| CB305431.1 | 1 | 583 | ||
| M97501.1 | AAA35693.1 | |||
| X64838.1 | 25 | 5293 | CAA46050.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv3630973 | Chr.12:122263863 - 122274137 on Build GRCh38 | Gain |
 CLIP1
VPS33A
|
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Additional Information:
For this assay, SNP(s) [rs148090344] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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