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See other BAG6 CNV Assays ›
Gene Symbol
BAG6
Assay Reference Genome
Location

Chr.6:31658976 on build GRCh38
Cytoband
6p21.33
Assay ID Hs02792407_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 7917

Gene Name:

 BCL2 associated athanogene 6

Gene Aliases:

 BAG-6, BAT3, D6S52E, G3

Location:

 Chr.6:31639028-31660900 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BAG6 XM_017011279.1 XP_016866768.1

Target Gene Details

Entrez Gene ID:

 57827

Gene Name:

 chromosome 6 open reading frame 47

Gene Aliases:

 D6S53E, G4, NG34

Location:

 Chr.6:31658298-31660772 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C6orf47 NM_021184.3 1 1797 NP_067007.3
AJ245433.1 1 1758 CAB51603.1
AK315349.1
BC012950.1 1 1797 AAH12950.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv462871 Chr.6:31607499 - 31664357 on Build GRCh38 Loss PRRC2A APOM BAG6 AIF1 GPANK1 C6orf47 MIR6832 SNORA38
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion TNXA LTA APOM ABHD16A LY6G6D DXO NEU1 DDAH2 LTB EHMT2 BAG6 HLA-DRB6 C6orf48 SNORD52 C4B MICB AIF1 MIR4646 SNORD48 C6orf25 LOC101929163 FKBPL AGER CLIC1 HSPA1B LY6G5B PPT2 ATF6B PRRC2A CSNK2B LOC100287329 LOC102725068 PRRT1 MCCD1 DDX39B-AS1 GPANK1 C4A GPSM3 TNF MIR6721 PPT2-EGFL8 LY6G5C SNORA38 TNXB DDX39B HSPA1L MIR1236 LY6G6C C2 BTNL2 ATP6V1G2 MIR6832 SNORD84 MSH5 ATP6V1G2-DDX39B LSM2 NOTCH4 VWA7 LY6G6E HCG23 SAPCD1-AS1 SKIV2L C6orf47 NELFE HSPA1A LY6G6F ZBTB12 NCR3 LOC100507547 SLC44A4 STK19 C6orf10 HCP5 LST1 CYP21A1P HLA-DRA MIR6833 C2-AS1 AGPAT1 HLA-DRB1 CYP21A2 HCG26 CFB NFKBIL1 SAPCD1 EGFL8 HLA-DRB5 SNORD117 PBX2 MSH5-SAPCD1 VARS RNF5
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion LTA HLA-DQB1 BRD2 NEU1 DDAH2 LTB EHMT2 KIFC1 SNORD52 C4B MICB HCG25 PSMB8 MIR219A1 FKBPL LY6G5B PPT2 COL11A2 LOC100287329 LOC102725068 MCCD1 HCG24 PPT2-EGFL8 RING1 TNXB DDX39B TAPBP HLA-DPB2 MIR1236 LY6G6C MIR6873 MIR6832 DAXX MSH5 ATP6V1G2-DDX39B LSM2 NOTCH4 LY6G6E HCG23 NELFE HSPA1A SLC44A4 HLA-DPA1 HCP5 LST1 CYP21A1P HLA-DRA MIR6833 AGPAT1 HLA-DRB1 HSD17B8 NFKBIL1 VPS52 RGL2 LOC100294145 PHF1 EGFL8 TAP2 MSH5-SAPCD1 VARS HLA-DQB2 TNXA APOM ABHD16A HLA-DQB1-AS1 HLA-DQA1 LY6G6D DXO SYNGAP1 BAG6 HLA-DRB6 PSMB9 C6orf48 AIF1 HLA-DQA2 MIR4646 HLA-DOB HLA-DMA HLA-DPB1 SNORD48 PSMB8-AS1 C6orf25 MIR5004 LOC101929163 AGER CLIC1 HSPA1B B3GALT4 ZBTB9 ATF6B SLC39A7 PRRC2A HLA-DMB CSNK2B ZBTB22 PRRT1 DDX39B-AS1 GPANK1 C4A GPSM3 PFDN6 TNF MIR6721 LY6G5C SNORA38 HSPA1L C2 BTNL2 ATP6V1G2 SNORD84 RPS18 VWA7 MIR3135B HLA-DOA SAPCD1-AS1 MIR6834 SKIV2L C6orf47 LY6G6F ZBTB12 NCR3 CUTA RXRB LOC100507547 STK19 TAP1 C6orf10 PPP1R2P1 C2-AS1 CYP21A2 HCG26 CFB WDR46 SAPCD1 HLA-DRB5 SNORD117 PBX2 RNF5
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss TNXA LTA APOM ABHD16A LY6G6D DXO NEU1 DDAH2 LTB EHMT2 BAG6 C6orf48 SNORD52 C4B MICB AIF1 MIR4646 SNORD48 C6orf25 MIR6891 CLIC1 HSPA1B LY6G5B PRRC2A CSNK2B LOC100287329 LOC102725068 MCCD1 DDX39B-AS1 GPANK1 C4A MICA TNF LY6G5C SNORA38 TNXB DDX39B HSPA1L MIR1236 LY6G6C C2 ATP6V1G2 MIR6832 SNORD84 MSH5 ATP6V1G2-DDX39B LSM2 VWA7 LY6G6E HLA-B SAPCD1-AS1 SKIV2L C6orf47 NELFE HSPA1A LY6G6F ZBTB12 NCR3 SLC44A4 STK19 HCP5 LST1 CYP21A1P C2-AS1 CYP21A2 HCG26 CFB NFKBIL1 SAPCD1 SNORD117 MSH5-SAPCD1 VARS
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion LTA HLA-DQB1 BRD2 NEU1 DDAH2 LTB EHMT2 KIFC1 SNORD52 C4B MICB HCG25 PSMB8 MIR219A1 FKBPL LY6G5B PPT2 COL11A2 LOC100287329 LOC102725068 MCCD1 HCG24 PPT2-EGFL8 RING1 TNXB DDX39B TAPBP HLA-DPB2 MIR1236 LY6G6C MIR6873 MIR6832 DAXX MSH5 ATP6V1G2-DDX39B LSM2 NOTCH4 LY6G6E HCG23 NELFE HSPA1A SLC44A4 HLA-DPA1 HCP5 LST1 CYP21A1P HLA-DRA MIR6833 AGPAT1 HLA-DRB1 HSD17B8 NFKBIL1 VPS52 RGL2 LOC100294145 PHF1 EGFL8 TAP2 MSH5-SAPCD1 VARS HLA-DQB2 TNXA APOM ABHD16A HLA-DQB1-AS1 HLA-DQA1 LY6G6D DXO SYNGAP1 BAG6 HLA-DRB6 PSMB9 C6orf48 AIF1 HLA-DQA2 MIR4646 HLA-DOB HLA-DMA HLA-DPB1 SNORD48 PSMB8-AS1 C6orf25 MIR5004 LOC101929163 AGER CLIC1 HSPA1B B3GALT4 ZBTB9 ATF6B SLC39A7 PRRC2A HLA-DMB CSNK2B ZBTB22 PRRT1 DDX39B-AS1 GPANK1 C4A GPSM3 PFDN6 TNF MIR6721 LY6G5C SNORA38 HSPA1L C2 BTNL2 ATP6V1G2 SNORD84 RPS18 VWA7 MIR3135B HLA-DOA SAPCD1-AS1 MIR6834 SKIV2L C6orf47 LY6G6F ZBTB12 NCR3 CUTA RXRB LOC100507547 STK19 TAP1 C6orf10 PPP1R2P1 C2-AS1 CYP21A2 HCG26 CFB WDR46 SAPCD1 HLA-DRB5 SNORD117 PBX2 RNF5
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss TNXA LTA APOM ABHD16A LY6G6D DXO NEU1 DDAH2 LTB EHMT2 BAG6 C6orf48 SNORD52 C4B MICB AIF1 MIR4646 SNORD48 C6orf25 MIR6891 LOC101929163 FKBPL AGER CLIC1 HSPA1B LY6G5B PPT2 ATF6B PRRC2A CSNK2B LOC100287329 LOC102725068 PRRT1 MCCD1 DDX39B-AS1 GPANK1 C4A MICA GPSM3 TNF MIR6721 PPT2-EGFL8 LY6G5C SNORA38 TNXB DDX39B HSPA1L MIR1236 LY6G6C C2 BTNL2 ATP6V1G2 MIR6832 SNORD84 MSH5 ATP6V1G2-DDX39B LSM2 NOTCH4 VWA7 LY6G6E HLA-B HCG23 SAPCD1-AS1 SKIV2L C6orf47 NELFE HSPA1A LY6G6F ZBTB12 NCR3 LOC100507547 SLC44A4 STK19 C6orf10 HCP5 LST1 CYP21A1P HLA-DRA MIR6833 C2-AS1 AGPAT1 CYP21A2 HCG26 CFB NFKBIL1 SAPCD1 EGFL8 SNORD117 PBX2 MSH5-SAPCD1 VARS RNF5
nsv1161370 Chr.6:31600692 - 31714252 on Build GRCh38 Deletion APOM ABHD16A LY6G5B MIR6832 PRRC2A CSNK2B BAG6 LY6G6E AIF1 GPANK1 C6orf47 MIR4646 LY6G6F LY6G5C SNORA38
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss LTA APOM ABHD16A DDX39B LTB ATP6V1G2 MIR6832 SNORD84 BAG6 ATP6V1G2-DDX39B AIF1 C6orf47 NCR3 LST1 LY6G5B PRRC2A CSNK2B NFKBIL1 LOC100287329 MCCD1 DDX39B-AS1 GPANK1 SNORD117 TNF LY6G5C SNORA38

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