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See other CNOT3 CNV Assays ›
Gene Symbol
CNOT3
Assay Reference Genome
Location

Chr.19:54152271 on build GRCh38
Cytoband
19q13.42
Assay ID Hs02800512_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 4849

Gene Name:

 CCR4-NOT transcription complex subunit 3

Gene Aliases:

 LENG2, NOT3, NOT3H

Location:

 Chr.19:54137689-54155708 on Build GRCh38

Assay Gene Location:

 Within Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CNOT3 NM_014516.3 14 1975 NP_055331.1
XM_005278279.1 14 1978 XP_005278336.1
XM_005278280.2 14 2012 XP_005278337.1
XM_005278281.1 14 1975 XP_005278338.1
XM_005278282.2 14 1978 XP_005278339.1
XM_011526992.1 14 1978 XP_011525294.1
XM_011526993.2 14 1978 XP_011525295.1
AB014591.1 13 3249
AF180474.1 13 1701 AAF29828.1
AK160386.1 13 2164 BAD18729.1
AK300434.1 14 1913
AL133647.1 9 1462 CAB63766.1
BC016474.1 14 1928 AAH16474.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3644782 Chr.19:54138064 - 54154026 on Build GRCh38 Gain CNOT3
esv3644783 Chr.19:54151022 - 54159664 on Build GRCh38 Gain LENG1 CNOT3
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss LENG1 TFPT PRPF31 MBOAT7 NDUFA3 CNOT3 TMC4
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion OSCAR LENG1 TSEN34 TFPT PRPF31 MBOAT7 NDUFA3 CNOT3 TMC4
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion ZNF813 MIR520E MIR498 OSCAR CACNG7 CACNG8 LOC284379 PRKCG MIR521-1 MIR517A NDUFA3 LILRA6 MIR517B CNOT3 DPRX VN1R2 MIR371B TSEN34 TFPT MIR512-2 MIR1283-2 MIR520A RPS9 MIR372 MIR519A2 ZNF665 ZNF761 MIR520H MIR515-1 MIR517C LENG1 MIR4752 PRPF31 LILRB2 MIR1323 ZNF331 MIR516B1 MIR520C MIR524 MIR512-1 TMC4 MIR519D MIR516B2 VN1R4 LOC105372457 TPM3P9 MIR516A2 MIR373 MIR518A2 MIR516A1 ZNF677 MIR519E NLRP12 MIR518D MIR525 FAM90A27P MIR935 MBOAT7 MIR526A1 MIR519B MIR526A2 MIR522 MIR520D MIR518E MIR371A MIR518C MIR518B MIR520B MIR523 MIR526B MIR518F LILRA5 MIR515-2 MIR519A1 MIR519C ZNF765 MIR1283-1 TARM1 VSTM1 ZNF525 LILRB3 ZNF818P MIR521-2 MYADM MIR527 MIR520G LILRB5 ZNF845 MIR518A1 BIRC8 MIR520F CACNG6

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