Hs02811711_cn

• Gene Symbol: CAPN9
• Assay Reference Genome Location: Chr.1:230747464 on build GRCh38
• Cytoband: 1q42.2

Target Gene Details

• Entrez Gene ID: 10753
• Gene Name: calpain 9
• Gene Aliases: GC36, nCL-4
• Location: Chr.1:230747289-230803356 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CAPN9	NM_001319676.1	1	81	NP_001306605.1
	NM_006615.2	1	81	NP_006606.1
	NM_016452.2	1	81	NP_057536.1
	XM_011544017.1	1	65	XP_011542319.1
	XM_011544018.1	1	65	XP_011542320.1
	XM_011544019.2	1	176	XP_011542321.1
	XM_017000098.1	1	65	XP_016855587.1
	AB038463.1	1	50	BAA92137.1
	AF022799.1	1	81	AAB80762.1
	AK298024.1
	AK313629.1	1	65
	BC027993.1			AAH27993.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3589093	Chr.1:230482037 - 231277190 on Build GRCh38	Gain	TRIM67 GNPAT TTC13 LOC149373 COG2 MIR1182 LOC101927604 FAM89A ARV1 LOC101927553 C1orf198 AGT CAPN9 C1orf131
nsv832836	Chr.1:230693328 - 230832263 on Build GRCh38	Loss	AGT CAPN9 COG2
nsv549335	Chr.1:230733804 - 230797361 on Build GRCh38	Gain	CAPN9

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

proteolysis
digestion

Function(s)

calcium-dependent cysteine-type endopeptidase activity
calcium ion binding