Hs02905273_cn

• Gene Symbol: YBX2
• Assay Reference Genome Location: Chr.17:7288626 on build GRCh38
• Cytoband: 17p13.1

Target Gene Details

• Entrez Gene ID: 51087
• Gene Name: Y-box binding protein 2
• Gene Aliases: CONTRIN, CSDA3, DBPC, MSY2
• Location: Chr.17:7288252-7294602 on Build GRCh38
• Assay Gene Location: Overlaps Intron 9 - Exon 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YBX2	NM_015982.3			NP_057066.2
	XM_017024713.1			XP_016880202.1
	AB208818.1			BAD92055.1
	AF096834.1			AAD30662.1
	AK092747.1
	BC033800.1			AAH33800.1
	BC047760.1			AAH47760.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422288	Chr.17:6789933 - 7646709 on Build GRCh38	Deletion	NEURL4 YBX2 PHF23 ASGR1 RNASEK-C17orf49 TEKT1 ATP1B2 SLC16A13 SNORA48 FGF11 MIR195 TMEM256-PLSCR3 ZBTB4 TNFSF12 SHBG SENP3 GABARAP CLDN7 ALOX12P2 ASGR2 SLC35G6 TMEM95 SNORA67 ALOX12-AS1 CHRNB1 MIR497 C17orf74 LOC100996842 SNORD10 GPS2 TNK1 C17orf49 ACADVL SAT2 NLGN2 SLC16A11 CD68 ACAP1 MPDU1 MIR324 SPEM1 MIR497HG SOX15 KCTD11 DLG4 LOC107983988 CTDNEP1 TMEM102 TNFSF12-TNFSF13 RNASEK DVL2 FBXO39 EIF4A1 PLSCR3 ALOX12 SENP3-EIF4A1 TMEM256 EIF5A POLR2A TNFSF13 FXR2 CLEC10A BCL6B SLC2A4 ELP5
nsv952118	Chr.17:7174582 - 7456981 on Build GRCh38	Deletion	NEURL4 ACAP1 MIR324 SPEM1 YBX2 PHF23 ASGR1 KCTD11 DLG4 LOC107983988 CTDNEP1 TMEM102 FGF11 DVL2 TMEM256-PLSCR3 GABARAP CLDN7 PLSCR3 TMEM256 TMEM95 EIF5A CHRNB1 C17orf74 GPS2 TNK1 ACADVL SLC2A4 NLGN2 ELP5
esv2665200	Chr.17:7091816 - 7333062 on Build GRCh38	Deletion	NEURL4 MIR324 YBX2 GABARAP CLDN7 ASGR2 PHF23 ASGR1 DLG4 CTDNEP1 EIF5A GPS2 DVL2 ACADVL SLC2A4 ELP5
nsv574322	Chr.17:7010333 - 7689462 on Build GRCh38	Loss	NEURL4 YBX2 PHF23 ASGR1 RNASEK-C17orf49 ATP1B2 WRAP53 SLC16A13 SNORA48 FGF11 MIR195 TP53 TMEM256-PLSCR3 ZBTB4 TNFSF12 SHBG SENP3 GABARAP CLDN7 ASGR2 SLC35G6 TMEM95 SNORA67 ALOX12-AS1 CHRNB1 MIR497 C17orf74 LOC100996842 SNORD10 GPS2 TNK1 C17orf49 ACADVL SAT2 NLGN2 SLC16A11 CD68 ACAP1 MPDU1 MIR324 SPEM1 MIR497HG SOX15 KCTD11 DLG4 LOC107983988 CTDNEP1 TMEM102 TNFSF12-TNFSF13 RNASEK DVL2 EIF4A1 PLSCR3 ALOX12 SENP3-EIF4A1 TMEM256 EIF5A POLR2A TNFSF13 FXR2 CLEC10A BCL6B SLC2A4 ELP5
nsv1963	Chr.17:7244585 - 7333855 on Build GRCh38	Deletion	NEURL4 YBX2 CLDN7 GPS2 CTDNEP1 SLC2A4 ELP5 EIF5A
esv3639863	Chr.17:7280422 - 7290803 on Build GRCh38	Loss	YBX2 SLC2A4

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
spermatogenesis
translational attenuation
oocyte development

Function(s)

DNA binding
RNA binding