Genomic Map
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Target Gene Details
Entrez Gene ID: | 5130 |
Gene Name: | phosphate cytidylyltransferase 1, choline, alpha |
Gene Aliases: |
CCTA, CT, CTA, CTPCT, PCYT1, SMDCRD |
Location: |
Chr.3:196237745-196287752 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 5 - Exon 5 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| PCYT1A | NM_001312673.1 | NP_001299602.1 | ||
| NM_005017.3 | NP_005008.2 | |||
| AK304534.1 | ||||
| AK309073.1 | 4 | 499 | ||
| AK309300.1 | 4 | 504 | ||
| AK313450.1 | ||||
| BC046355.1 | AAH46355.1 | |||
| L28957.1 | AAA72127.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv3599278 | Chr.3:196229547 - 196249176 on Build GRCh38 | Gain |
 SLC51A
PCYT1A
|
| nsv997797 | Chr.3:195931489 - 196486087 on Build GRCh38 | Gain |
RNF168
LINC00885
TFRC
LOC105374301
SLC51A
PCYT1A
TM4SF19-TCTEX1D2
TCTEX1D2
TM4SF19-AS1
UBXN7-AS1
TM4SF19
SDHAP1
UBXN7
ZDHHC19
|
| esv3599276 | Chr.3:196227560 - 196295937 on Build GRCh38 | Loss |
TCTEX1D2
SLC51A
PCYT1A
|
| nsv1009811 | Chr.3:196124925 - 196411200 on Build GRCh38 | Gain |
LINC00885
TCTEX1D2
TM4SF19-AS1
SLC51A
PCYT1A
TM4SF19-TCTEX1D2
TM4SF19
UBXN7
ZDHHC19
|
| nsv593071 | Chr.3:196132016 - 196345571 on Build GRCh38 | Gain |
LINC00885
TCTEX1D2
TM4SF19-AS1
SLC51A
PCYT1A
TM4SF19-TCTEX1D2
TM4SF19
ZDHHC19
|
| esv2759213 | Chr.3:195382058 - 196344722 on Build GRCh38 | Gain+Loss |
SDHAP2
LINC00885
TFRC
LOC105374301
SLC51A
PCYT1A
TM4SF19-TCTEX1D2
MIR570
APOD
TNK2
LINC00969
TCTEX1D2
LOC105374299
TM4SF19-AS1
MUC20
MUC4
ACAP2
LOC105374297
MIR6829
TM4SF19
SDHAP1
PPP1R2
LOC101929697
ZDHHC19
|
Back To TopMore Information
Set Membership: |
Intragenic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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