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See other SH2D3C CNV Assays ›
Gene Symbol
SH2D3C
Assay Reference Genome
Location

Chr.9:127738836 on build GRCh38
Cytoband
9q34.11
Assay ID Hs02955502_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 10044

Gene Name:

 SH2 domain containing 3C

Gene Aliases:

 CHAT, NSP3, PRO34088, SHEP1

Location:

 Chr.9:127738317-127778769 on Build GRCh38

Assay Gene Location:

 Within Exon 18
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SH2D3C NM_001142531.1 11 2027 NP_001136003.1
NM_001142532.1 11 2276 NP_001136004.1
NM_001142533.1 10 2164 NP_001136005.1
NM_001142534.1 10 2136 NP_001136006.1
NM_001252334.1 12 2533 NP_001239263.1
NM_005489.3 11 2162 NP_005480.2
NM_170600.2 12 2635 NP_733745.1
XM_005251639.1 11 2143 XP_005251696.1
XM_011518114.1 12 2619 XP_011516416.1
XM_011518115.1 12 2579 XP_011516417.1
XM_011518117.2 10 3255 XP_011516419.1
XM_017014174.1 10 2416 XP_016869663.1
AF124251.1 11 2074 AAD28246.1
AI472242.1
AJ420431.1 5 704
AK056068.1 10 2164
AK096983.1 8 1457
AK128287.1 13 2566
AK291393.1 10 2128
AK292041.1 11 2090
AK292718.1 12 2506
AK294386.1 11 2027
AY358089.1 11 2144 AAQ88456.1
AY358440.1 11 2063 AAQ89948.1
BC027962.1 11 2033 AAH27962.1
BC032365.1 12 2510 AAH32365.1
BX647905.1 12 2459 CAI46101.1
CU454732.1 4 511
CU455802.1 4 511

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv12879n54 Chr.9:127731234 - 127824409 on Build GRCh38 Loss MIR3960 TTC16 TOR2A SH2D3C MIR2861 LOC102723566 FPGS CDK9 ENG
nsv615371 Chr.9:127735841 - 127787855 on Build GRCh38 Loss MIR3960 SH2D3C MIR2861 CDK9
nsv471323 Chr.9:127727464 - 127845239 on Build GRCh38 Loss MIR3960 TTC16 TOR2A SH2D3C MIR2861 LOC102723566 FPGS CDK9 ENG
nsv466571 Chr.9:127707924 - 127774438 on Build GRCh38 Loss PTRH1 TTC16 CFAP157 TOR2A SH2D3C

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