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See other ATG7 CNV Assays ›
Gene Symbol
ATG7
Assay Reference Genome
Location

Chr.3:11556171 on build GRCh38
Cytoband
3p25.3
Assay ID Hs03005182_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 10533

Gene Name:

 autophagy related 7

Gene Aliases:

 APG7-LIKE, APG7L, GSA7

Location:

 Chr.3:11272324-11564704 on Build GRCh38

Assay Gene Location:

 Within Exon 27
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATG7 NM_001136031.2 18 3476 NP_001129503.2
NM_001144912.1 17 3317 NP_001138384.1
NM_006395.2 19 3557 NP_006386.1
XM_017005547.1 XP_016861036.1
XM_017005554.1 XP_016861043.1
AL122075.1 13 2906 CAB59250.1

Target Gene Details

Entrez Gene ID:

 9686

Gene Name:

 vestigial like family member 4

Gene Aliases:

 VGL-4

Location:

 Chr.3:11556067-11720768 on Build GRCh38

Assay Gene Location:

 Within Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
VGLL4 NM_001128219.2 5 3735 NP_001121691.1
NM_001128220.2 4 3110 NP_001121692.1
NM_001128221.2 4 3324 NP_001121693.1
NM_001284390.1 7 3779 NP_001271319.1
NM_001284391.1 5 3452 NP_001271320.1
NM_014667.3 6 3646 NP_055482.2
XM_011534267.2 7 3421 XP_011532569.1
XM_011534268.1 5 3749 XP_011532570.1
XM_011534269.1 5 3443 XP_011532571.1
XM_017007541.1 7 3444 XP_016863030.1
XM_017007542.1 6 3633 XP_016863031.1
AI809612.1 1 111
AK126479.1 2 4369
AK130542.1 6 3441 BAC85375.1
BU682809.1 1 120
D50911.3 6 3394

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv955314 Chr.3:11552827 - 11568726 on Build GRCh38 Deletion ATG7 VGLL4
nsv436362 Chr.3:10048344 - 11860564 on Build GRCh38 Deletion IRAK2 ATP2B2 GHRL HRH1 SLC6A11 FANCD2OS BRK1 SLC6A1 GHRLOS TAMM41 VHL LINC00852 TATDN2 LOC101927467 SEC13 SLC6A1-AS1 LINC00606 FANCD2 MIR885 ATG7 VGLL4 MIR378B ATP2B2-IT2
nsv517831 Chr.3:11541780 - 11576994 on Build GRCh38 Loss ATG7 VGLL4
esv2677845 Chr.3:11489013 - 11864643 on Build GRCh38 Deletion TAMM41 ATG7 VGLL4
dgv762e201 Chr.3:10008967 - 11913136 on Build GRCh38 Deletion IRAK2 ATP2B2 FANCD2OS SLC6A1 EMC3 GHRLOS VHL LINC00852 TATDN2 LOC101927467 SEC13 SLC6A1-AS1 LINC00606 FANCD2P2 MIR885 ATP2B2-IT2 GHRL HRH1 SLC6A11 BRK1 CIDECP TAMM41 LOC401052 FANCD2 ATG7 VGLL4 MIR378B
nsv1121603 Chr.3:10071433 - 11889279 on Build GRCh38 Deletion IRAK2 ATP2B2 GHRL HRH1 SLC6A11 FANCD2OS BRK1 SLC6A1 GHRLOS TAMM41 VHL LINC00852 TATDN2 LOC101927467 SEC13 SLC6A1-AS1 LINC00606 FANCD2 FANCD2P2 MIR885 ATG7 VGLL4 MIR378B ATP2B2-IT2
nsv436869 Chr.3:10064456 - 11877985 on Build GRCh38 Insertion IRAK2 ATP2B2 GHRL HRH1 SLC6A11 FANCD2OS BRK1 SLC6A1 GHRLOS TAMM41 VHL LINC00852 TATDN2 LOC101927467 SEC13 SLC6A1-AS1 LINC00606 FANCD2 FANCD2P2 MIR885 ATG7 VGLL4 MIR378B ATP2B2-IT2
nsv1073204 Chr.3:9996548 - 11875005 on Build GRCh38 Deletion IRAK2 ATP2B2 FANCD2OS SLC6A1 EMC3 GHRLOS VHL LINC00852 TATDN2 LOC101927467 SEC13 SLC6A1-AS1 LINC00606 FANCD2P2 MIR885 ATP2B2-IT2 GHRL HRH1 SLC6A11 BRK1 CIDECP TAMM41 LOC401052 EMC3-AS1 FANCD2 ATG7 VGLL4 MIR378B

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