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Gene Symbol
CLEC4M
Assay Reference Genome
Location

Chr.19:7768890 on build GRCh38
Cytoband
19p13.2
Assay ID Hs03010192_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10332

Gene Name:

 C-type lectin domain family 4 member M

Gene Aliases:

 CD209L, CD299, DC-SIGN2, DC-SIGNR, DCSIGNR, HP10347, L-SIGN, LSIGN

Location:

 Chr.19:7763052-7770559 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CLEC4M NM_001144904.1 7 1067 NP_001138376.1
NM_001144905.1 8 1148 NP_001138377.1
NM_001144906.1 6 812 NP_001138378.1
NM_001144907.1 7 1019 NP_001138379.1
NM_001144908.1 6 831 NP_001138380.1
NM_001144909.1 8 1082 NP_001138381.1
NM_001144910.1 8 1151 NP_001138382.1
NM_001144911.1 5 1023 NP_001138383.1
NM_014257.4 7 1220 NP_055072.3
NR_026707.1 6 1668
NR_026708.1 5 1555
NR_026709.1 4 1492
XM_006722611.2 7 1152 XP_006722674.1
XM_006722612.3 6 1226 XP_006722675.1
XM_006722613.3 6 1228 XP_006722676.1
XM_006722614.3 5 1144 XP_006722677.1
XM_006722615.2 6 1107 XP_006722678.1
AB015629.1 5 929 BAA76496.1
AF245219.2 7 1126 AAG13848.2
AF290887.1 8 1086 AAK20998.1
AK292278.1 8 1147
AK304499.1 7 1000
AK314704.1 8 1081
AY042234.1 7 1102 AAK91859.1
AY042235.1 6 1550 AAK91860.1
AY042236.1 5 1437 AAK91861.1
AY042237.1 6 713 AAK91862.1
AY042238.1 7 901 AAK91863.1
AY042239.1 4 1374 AAK91864.1
AY042240.1 6 694 AAK91865.1
AY343913.1 8 965 AAR04559.1
BC038851.1 7 1174 AAH38851.1
BC110614.2 5 1075 AAI10615.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1058579 Chr.19:7768804 - 7820978 on Build GRCh38 Gain CLEC4GP1 CLEC4M
nsv1060887 Chr.19:7089546 - 7861087 on Build GRCh38 Gain XAB2 CLEC4G ARHGEF18 C19orf45 PNPLA6 CLEC4M CAMSAP3 STXBP2 MIR6792 CD209 INSR RETN EVI5L LOC100128573 FCER2 TRAPPC5 CLEC4GP1 MCEMP1 PCP2 PEX11G PET100 ZNF358 MCOLN1 LOC107985283
nsv833732 Chr.19:7672656 - 7871329 on Build GRCh38 Gain CLEC4G FCER2 TRAPPC5 CLEC4GP1 CLEC4M MCEMP1 CD209 EVI5L PRR36
esv2751809 Chr.19:6896369 - 7816144 on Build GRCh38 Gain ZNF557 CLEC4G C19orf45 MBD3L2 PNPLA6 CLEC4M MBD3L4 MIR6792 INSR RETN LOC100128573 FCER2 LOC729458 MBD3L3 CLEC4GP1 PCP2 FLJ25758 PET100 LOC107985283 XAB2 ARHGEF18 ADGRE1 CAMSAP3 STXBP2 ADGRE4P CD209 TRAPPC5 MCEMP1 PEX11G ZNF358 MCOLN1 MBD3L5
nsv1061452 Chr.19:7657750 - 7785131 on Build GRCh38 Gain CLEC4G FCER2 TRAPPC5 CLEC4M MCEMP1 CD209 RETN

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