Hs03076038_cn

• Gene Symbol: YBX2
• Assay Reference Genome Location: Chr.17:7289704 on build GRCh38
• Cytoband: 17p13.1

Target Gene Details

• Entrez Gene ID: 51087
• Gene Name: Y-box binding protein 2
• Gene Aliases: CONTRIN, CSDA3, DBPC, MSY2
• Location: Chr.17:7288252-7294602 on Build GRCh38
• Assay Gene Location: Overlaps Intron 7 - Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YBX2	NM_015982.3			NP_057066.2
	XM_017024713.1			XP_016880202.1
	AB208818.1			BAD92055.1
	AF096834.1			AAD30662.1
	AK092747.1
	AK315035.1
	BC033800.1			AAH33800.1
	BC047760.1			AAH47760.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422288	Chr.17:6789933 - 7646709 on Build GRCh38	Deletion	EIF4A1 CLEC10A ASGR1 TMEM256-PLSCR3 PHF23 ATP1B2 ALOX12 NLGN2 TNFSF12 TNFSF12-TNFSF13 ELP5 C17orf49 MIR497HG ACAP1 C17orf74 TMEM95 CHRNB1 GPS2 FXR2 SNORA67 SLC35G6 SOX15 TMEM102 FBXO39 KCTD11 SLC2A4 MPDU1 LOC100996842 TMEM256 MIR324 ALOX12-AS1 NEURL4 RNASEK MIR195 POLR2A ALOX12P2 TNFSF13 LOC107983988 EIF5A BCL6B SLC16A13 SENP3 ASGR2 GABARAP CLDN7 TNK1 ACADVL PLSCR3 SENP3-EIF4A1 DLG4 YBX2 MIR497 DVL2 SAT2 RNASEK-C17orf49 SNORA48 SNORD10 SPEM1 SLC16A11 SHBG FGF11 CTDNEP1 CD68 TEKT1 ZBTB4
nsv952118	Chr.17:7174582 - 7456981 on Build GRCh38	Deletion	ASGR1 TMEM256-PLSCR3 PHF23 LOC107983988 NLGN2 EIF5A ELP5 ACAP1 GABARAP C17orf74 CLDN7 TMEM95 CHRNB1 TNK1 GPS2 ACADVL PLSCR3 DLG4 TMEM102 KCTD11 YBX2 SLC2A4 DVL2 TMEM256 MIR324 NEURL4 SPEM1 FGF11 CTDNEP1
esv2665200	Chr.17:7091816 - 7333062 on Build GRCh38	Deletion	GPS2 ACADVL ASGR1 PHF23 DLG4 YBX2 EIF5A SLC2A4 DVL2 MIR324 ELP5 ASGR2 NEURL4 GABARAP CTDNEP1 CLDN7
nsv574322	Chr.17:7010333 - 7689462 on Build GRCh38	Loss	EIF4A1 CLEC10A ASGR1 TMEM256-PLSCR3 PHF23 ATP1B2 ALOX12 TP53 NLGN2 TNFSF12 WRAP53 TNFSF12-TNFSF13 ELP5 C17orf49 MIR497HG ACAP1 C17orf74 TMEM95 CHRNB1 GPS2 FXR2 SNORA67 SLC35G6 SOX15 TMEM102 KCTD11 SLC2A4 MPDU1 LOC100996842 TMEM256 MIR324 ALOX12-AS1 NEURL4 RNASEK MIR195 POLR2A TNFSF13 LOC107983988 EIF5A BCL6B SLC16A13 SENP3 ASGR2 GABARAP CLDN7 TNK1 ACADVL PLSCR3 SENP3-EIF4A1 DLG4 YBX2 MIR497 DVL2 SAT2 RNASEK-C17orf49 SNORA48 SNORD10 SPEM1 SLC16A11 SHBG FGF11 CTDNEP1 CD68 ZBTB4
nsv1963	Chr.17:7244585 - 7333855 on Build GRCh38	Deletion	SLC2A4 GPS2 ELP5 NEURL4 YBX2 CTDNEP1 CLDN7 EIF5A
esv3639863	Chr.17:7280422 - 7290803 on Build GRCh38	Loss	SLC2A4 YBX2

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
spermatogenesis
translational attenuation
oocyte development

Function(s)

DNA binding
RNA binding