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See other POU5F1 CNV Assays ›
Gene Symbol
POU5F1
Assay Reference Genome
Location

Chr.6:31170205 on build GRCh38
Cytoband
6p21.33
Assay ID Hs03175701_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5460

Gene Name:

 POU class 5 homeobox 1

Gene Aliases:

 OCT3, OCT4, OTF-3, OTF3, OTF4, Oct-3, Oct-4

Location:

 Chr.6:31164337-31170693 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
POU5F1 NM_002701.5 NP_002692.2
AB971680.1
AB971681.1
AM851116.1
BC117435.1
BC117437.1
CD247724.1
DQ486517.1
FM177951.1
FM177952.1
FM177953.1
FM177954.1
FM177955.1
FM177956.1
FM177957.1
FM177958.1
FM177959.1
FM177960.1
FM177961.1
FM177962.1
FM177963.1
FM177964.1
FM177965.1
FM177968.1
GU480808.1
GU480809.1
GU480810.1
GU480811.1
GU480812.1
GU480813.1
GU480815.1
GU480816.1
GU480817.1
GU480818.1
GU480819.1
GU480820.1
GU480821.1
GU480822.1
GU480823.1
GU480824.1
GU480825.1
GU480826.1
GU480827.1
GU480828.1
GU480829.1
GU480830.1
HQ122658.1
HQ122659.1
HQ122660.1
HQ122661.1
HQ122662.1
HQ122663.1
HQ122664.1
HQ122665.1
HQ122666.1
HQ122667.1
HQ122668.1
HQ122669.1
HQ122670.1
HQ122671.1
HQ122672.1
HQ122673.1
HQ122674.1
HQ122675.1
Z11898.1 CAA77951.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv525933 Chr.6:31113428 - 31174468 on Build GRCh38 Loss TCF19 CCHCR1 POU5F1 CDSN PSORS1C2 PSORS1C1 PSORS1C3
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion HLA-A RPP21 TCF19 ZFP57 C6orf15 TRIM10 POU5F1 HCG4 MRPS18B PSORS1C1 HLA-B HLA-C HCG9 MDC1 ZNRD1ASP LOC105375014 TRIM39-RPP21 HLA-K PSORS1C2 HLA-J HCG17 ZNRD1 SFTA2 LOC554223 PPP1R18 HCG22 PPP1R10 OR2H1 MIR4640 MUC22 HLA-F-AS1 OR14J1 OR2J2 CDSN DDR1 OR12D2 OR2H2 HLA-L HCG20 TRIM40 LINC00243 TUBB HCG4B HLA-F MIR877 TRIM39 HCG18 RNF39 MAS1L OR5V1 UBD FLOT1 C6orf136 DPCR1 PRR3 LOC101929006 NRM SNORD32B MUC21 IER3 MIR6891 MOG GABBR1 LINC01015 GNL1 OR11A1 PSORS1C3 ATAT1 VARS2 TRIM31 TRIM31-AS1 TRIM15 CCHCR1 GTF2H4 HCG8 PPP1R11 ABCF1 DHX16 HLA-H TRIM26 HLA-G IFITM4P MICA OR10C1 OR12D3 MDC1-AS1 HCG27 HLA-E
esv2759414 Chr.6:31060513 - 31574531 on Build GRCh38 Gain+Loss HCG26 MCCD1 TCF19 C6orf15 ATP6V1G2 POU5F1 ATP6V1G2-DDX39B PSORS1C1 HLA-B HLA-C NFKBIL1 MIR6891 PSORS1C2 DDX39B PSORS1C3 LOC100287329 SNORD84 CCHCR1 SNORD117 CDSN DDX39B-AS1 MICB LOC102725068 LTA HCP5 MICA HCG27
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss TCF19 C6orf15 POU5F1 MRPS18B FLOT1 PSORS1C1 HLA-C C6orf136 DPCR1 PRR3 NRM MDC1 MUC21 LOC105375014 IER3 GNL1 PSORS1C2 PSORS1C3 SFTA2 ATAT1 VARS2 PPP1R18 HCG22 PPP1R10 MIR4640 MUC22 CCHCR1 GTF2H4 CDSN DDR1 ABCF1 DHX16 HCG20 LINC00243 TUBB MDC1-AS1 HCG27 HLA-E MIR877
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion HLA-A RPP21 TCF19 ZFP57 C6orf15 TRIM10 POU5F1 HCG4 MRPS18B LINC01556 PSORS1C1 HCG9 MDC1 ZNRD1ASP LOC105375014 TRIM39-RPP21 HLA-K ZNF311 PSORS1C2 HLA-J OR2B3 HCG17 ZNRD1 SFTA2 LOC554223 PPP1R18 HCG22 PPP1R10 OR2H1 MIR4640 MUC22 HLA-F-AS1 OR14J1 OR2J2 CDSN DDR1 OR12D2 OR2H2 HLA-L HCG20 TRIM40 LINC00243 TUBB HCG4B HLA-F MIR877 HCG14 TRIM39 HCG18 RNF39 LOC100129636 MAS1L OR5V1 UBD HCG16 FLOT1 C6orf136 DPCR1 PRR3 LOC101929006 NRM SNORD32B OR2J3 MUC21 IER3 MOG GABBR1 LINC01015 GNL1 OR11A1 OR2W1 PSORS1C3 ATAT1 VARS2 TRIM31 TRIM31-AS1 TRIM15 CCHCR1 GTF2H4 TRIM27 HCG8 PPP1R11 ABCF1 DHX16 HLA-H LINC01623 TRIM26 HLA-G IFITM4P OR10C1 OR12D3 MDC1-AS1 HCG27 LINC00533 HLA-E
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion HLA-A RPP21 TCF19 C6orf15 TRIM10 POU5F1 HCG4 MRPS18B PSORS1C1 HLA-C HCG9 MDC1 ZNRD1ASP LOC105375014 TRIM39-RPP21 HLA-K PSORS1C2 HLA-J HCG17 ZNRD1 SFTA2 LOC554223 PPP1R18 HCG22 PPP1R10 MIR4640 MUC22 HLA-F-AS1 CDSN DDR1 HLA-L HCG20 TRIM40 LINC00243 TUBB HCG4B HLA-F MIR877 TRIM39 HCG18 RNF39 FLOT1 C6orf136 DPCR1 PRR3 NRM MUC21 IER3 GNL1 PSORS1C3 ATAT1 VARS2 TRIM31 TRIM31-AS1 TRIM15 CCHCR1 GTF2H4 HCG8 PPP1R11 ABCF1 DHX16 HLA-H TRIM26 HLA-G IFITM4P MDC1-AS1 HCG27 HLA-E
esv3608531 Chr.6:31163674 - 31304530 on Build GRCh38 Loss TCF19 POU5F1 HCG27 HLA-C PSORS1C3
dgv1174e214 Chr.6:31139843 - 31176217 on Build GRCh38 Gain TCF19 CCHCR1 POU5F1 PSORS1C1 PSORS1C3
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion TCF19 C6orf15 POU5F1 MRPS18B FLOT1 PSORS1C1 HLA-C C6orf136 DPCR1 PRR3 NRM MDC1 MUC21 LOC105375014 IER3 GNL1 PSORS1C2 PSORS1C3 SFTA2 ATAT1 VARS2 PPP1R18 HCG22 PPP1R10 MIR4640 MUC22 CCHCR1 GTF2H4 CDSN DDR1 ABCF1 DHX16 HCG20 LINC00243 TUBB MDC1-AS1 HCG27 HLA-E MIR877
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss HLA-A RPP21 TCF19 C6orf15 TRIM10 POU5F1 MRPS18B PSORS1C1 HLA-C HCG9 MDC1 ZNRD1ASP LOC105375014 TRIM39-RPP21 HLA-K PSORS1C2 HLA-J HCG17 ZNRD1 SFTA2 PPP1R18 HCG22 PPP1R10 MIR4640 MUC22 CDSN DDR1 HLA-L HCG20 TRIM40 LINC00243 TUBB HCG4B MIR877 TRIM39 HCG18 RNF39 FLOT1 C6orf136 DPCR1 PRR3 NRM MUC21 IER3 GNL1 PSORS1C3 ATAT1 VARS2 TRIM31 TRIM31-AS1 TRIM15 CCHCR1 GTF2H4 HCG8 PPP1R11 ABCF1 DHX16 HLA-H TRIM26 MDC1-AS1 HCG27 HLA-E
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication HCG26 RPP21 TCF19 C6orf15 TRIM10 POU5F1 MRPS18B PSORS1C1 HLA-B HLA-C MDC1 ZNRD1ASP LOC105375014 TRIM39-RPP21 PSORS1C2 HLA-J HCG17 ZNRD1 SFTA2 PPP1R18 HCG22 PPP1R10 MIR4640 MUC22 CDSN DDR1 HLA-L HCG20 TRIM40 LINC00243 TUBB MIR877 TRIM39 HCG18 RNF39 FLOT1 C6orf136 DPCR1 PRR3 NRM MUC21 IER3 MIR6891 GNL1 PSORS1C3 ATAT1 VARS2 TRIM31 TRIM31-AS1 TRIM15 CCHCR1 GTF2H4 HCG8 PPP1R11 ABCF1 LOC102725068 DHX16 TRIM26 HCP5 MICA MDC1-AS1 HCG27 HLA-E

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