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See other POU5F1 CNV Assays ›
Gene Symbol
POU5F1
Assay Reference Genome
Location

Chr.6:31165138 on build GRCh38
Cytoband
6p21.33
Assay ID Hs03180315_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5460

Gene Name:

 POU class 5 homeobox 1

Gene Aliases:

 OCT3, OCT4, OTF-3, OTF3, OTF4, Oct-3, Oct-4

Location:

 Chr.6:31164337-31170693 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
POU5F1 NM_001173531.2 NP_001167002.1
NM_001285986.1 NP_001272915.1
NM_001285987.1 NP_001272916.1
NM_002701.5 NP_002692.2
NM_203289.5 NP_976034.4
AA205411.1
AB971680.1
AB971681.1
BC117435.1
BC117437.1
DQ486514.1
DQ486515.1
DQ486516.1
DQ486517.1
GU480808.1
GU480809.1
GU480810.1
GU480811.1
GU480812.1
GU480813.1
GU480815.1
GU480816.1
GU480817.1
GU480818.1
GU480819.1
GU480820.1
GU480821.1
GU480822.1
GU480823.1
GU480824.1
GU480825.1
GU480826.1
GU480827.1
GU480828.1
GU480829.1
GU480830.1
HQ122658.1
HQ122659.1
HQ122660.1
HQ122661.1
HQ122662.1
HQ122663.1
HQ122664.1
HQ122665.1
HQ122666.1
HQ122667.1
HQ122668.1
HQ122669.1
HQ122670.1
HQ122671.1
HQ122672.1
HQ122673.1
HQ122674.1
HQ122675.1
KF880691.1
KF880692.1
KF880693.1
KJ624996.1
KJ700311.1
KM188057.1
S81255.1 AAB35990.1
Z11898.1 CAA77951.1
Z11899.1 CAA77952.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv525933 Chr.6:31113428 - 31174468 on Build GRCh38 Loss CCHCR1 PSORS1C2 POU5F1 CDSN PSORS1C3 TCF19 PSORS1C1
esv2759414 Chr.6:31060513 - 31574531 on Build GRCh38 Gain+Loss HCG26 POU5F1 PSORS1C3 PSORS1C1 MICA SNORD117 C6orf15 TCF19 DDX39B-AS1 HCG27 LOC102725068 ATP6V1G2 MIR6891 MICB CDSN HCP5 DDX39B HLA-C ATP6V1G2-DDX39B NFKBIL1 CCHCR1 LTA SNORD84 LOC100287329 PSORS1C2 HLA-B MCCD1
esv3608531 Chr.6:31163674 - 31304530 on Build GRCh38 Loss POU5F1 HLA-C PSORS1C3 TCF19 HCG27
dgv1174e214 Chr.6:31139843 - 31176217 on Build GRCh38 Gain CCHCR1 POU5F1 PSORS1C3 TCF19 PSORS1C1
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion MIR877 POU5F1 VARS2 HCG22 MRPS18B PSORS1C3 LINC00243 MUC21 GTF2H4 PSORS1C1 MDC1 DDR1 HLA-E MUC22 C6orf15 TCF19 HCG27 PPP1R18 LOC105375014 CDSN HLA-C ATAT1 FLOT1 C6orf136 ABCF1 HCG20 MDC1-AS1 SFTA2 CCHCR1 DPCR1 PSORS1C2 GNL1 IER3 TUBB DHX16 PPP1R10 PRR3 MIR4640 NRM
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion MIR877 OR2H1 HLA-G POU5F1 UBD VARS2 PSORS1C3 LINC00243 MUC21 GTF2H4 OR12D3 PSORS1C1 OR12D2 MDC1 TRIM15 RPP21 IFITM4P OR10C1 ZFP57 TCF19 SNORD32B PPP1R18 TRIM39 CDSN TRIM10 ATAT1 OR5V1 C6orf136 HCG20 MDC1-AS1 ZNRD1 HLA-J SFTA2 TRIM31-AS1 TRIM39-RPP21 IER3 TUBB HCG4 MOG OR2J2 DHX16 PPP1R10 TRIM31 HLA-H MAS1L MIR4640 HLA-A LOC101929006 OR11A1 HCG17 GABBR1 HCG22 MRPS18B RNF39 TRIM26 MICA DDR1 ZNRD1ASP OR14J1 HLA-L HLA-E MUC22 C6orf15 OR2H2 HCG18 HCG27 PPP1R11 MIR6891 LOC105375014 HLA-C FLOT1 ABCF1 HCG9 LOC554223 LINC01015 CCHCR1 DPCR1 HCG4B PSORS1C2 HLA-B GNL1 HLA-F-AS1 PRR3 HLA-F NRM HCG8 TRIM40 HLA-K
nsv524061 Chr.6:31139310 - 31166166 on Build GRCh38 Loss CCHCR1 PSORS1C2 POU5F1 TCF19 PSORS1C1
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss MIR877 POU5F1 VARS2 HCG22 MRPS18B PSORS1C3 LINC00243 MUC21 GTF2H4 PSORS1C1 MDC1 DDR1 HLA-E MUC22 C6orf15 TCF19 HCG27 PPP1R18 LOC105375014 CDSN HLA-C ATAT1 FLOT1 C6orf136 ABCF1 HCG20 MDC1-AS1 SFTA2 CCHCR1 DPCR1 PSORS1C2 GNL1 IER3 TUBB DHX16 PPP1R10 PRR3 MIR4640 NRM
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion MIR877 OR2H1 HCG14 HLA-G POU5F1 UBD VARS2 PSORS1C3 LINC00243 MUC21 ZNF311 GTF2H4 OR12D3 PSORS1C1 OR12D2 MDC1 TRIM15 RPP21 IFITM4P OR10C1 ZFP57 TCF19 SNORD32B PPP1R18 TRIM39 CDSN TRIM10 ATAT1 OR5V1 C6orf136 HCG20 MDC1-AS1 LOC100129636 ZNRD1 HLA-J SFTA2 LINC01556 TRIM31-AS1 TRIM39-RPP21 IER3 TUBB HCG4 MOG OR2J2 DHX16 PPP1R10 OR2J3 TRIM31 HLA-H MAS1L MIR4640 HLA-A LOC101929006 LINC01623 HCG16 TRIM27 OR11A1 HCG17 GABBR1 HCG22 MRPS18B RNF39 TRIM26 DDR1 ZNRD1ASP OR14J1 HLA-L HLA-E MUC22 C6orf15 OR2H2 HCG18 LINC00533 HCG27 PPP1R11 LOC105375014 FLOT1 ABCF1 HCG9 LOC554223 LINC01015 CCHCR1 DPCR1 HCG4B PSORS1C2 GNL1 HLA-F-AS1 OR2W1 PRR3 HLA-F OR2B3 NRM HCG8 TRIM40 HLA-K
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion MIR877 HLA-G POU5F1 VARS2 PSORS1C3 LINC00243 MUC21 GTF2H4 PSORS1C1 MDC1 TRIM15 RPP21 IFITM4P TCF19 PPP1R18 TRIM39 CDSN TRIM10 ATAT1 C6orf136 HCG20 MDC1-AS1 ZNRD1 HLA-J SFTA2 TRIM31-AS1 TRIM39-RPP21 IER3 TUBB HCG4 DHX16 PPP1R10 TRIM31 HLA-H MIR4640 HLA-A HCG17 HCG22 MRPS18B RNF39 TRIM26 DDR1 ZNRD1ASP HLA-L HLA-E MUC22 C6orf15 HCG18 HCG27 PPP1R11 LOC105375014 HLA-C FLOT1 ABCF1 HCG9 LOC554223 CCHCR1 DPCR1 HCG4B PSORS1C2 GNL1 HLA-F-AS1 PRR3 HLA-F NRM HCG8 TRIM40 HLA-K
nsv970105 Chr.6:31163935 - 31166130 on Build GRCh38 Duplication POU5F1 TCF19
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss MIR877 POU5F1 VARS2 PSORS1C3 LINC00243 MUC21 GTF2H4 PSORS1C1 MDC1 TRIM15 RPP21 TCF19 PPP1R18 TRIM39 CDSN TRIM10 ATAT1 C6orf136 HCG20 MDC1-AS1 ZNRD1 HLA-J SFTA2 TRIM31-AS1 TRIM39-RPP21 IER3 TUBB DHX16 PPP1R10 TRIM31 HLA-H MIR4640 HLA-A HCG17 HCG22 MRPS18B RNF39 TRIM26 DDR1 ZNRD1ASP HLA-L HLA-E MUC22 C6orf15 HCG18 HCG27 PPP1R11 LOC105375014 HLA-C FLOT1 ABCF1 HCG9 CCHCR1 DPCR1 HCG4B PSORS1C2 GNL1 PRR3 NRM HCG8 TRIM40 HLA-K
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication MIR877 HCG26 POU5F1 VARS2 PSORS1C3 LINC00243 MUC21 GTF2H4 PSORS1C1 MDC1 TRIM15 RPP21 TCF19 LOC102725068 PPP1R18 TRIM39 CDSN HCP5 TRIM10 ATAT1 C6orf136 HCG20 MDC1-AS1 ZNRD1 HLA-J SFTA2 TRIM31-AS1 TRIM39-RPP21 IER3 TUBB DHX16 PPP1R10 TRIM31 MIR4640 HCG17 HCG22 MRPS18B RNF39 TRIM26 MICA DDR1 ZNRD1ASP HLA-L HLA-E MUC22 C6orf15 HCG18 HCG27 PPP1R11 MIR6891 LOC105375014 HLA-C FLOT1 ABCF1 CCHCR1 DPCR1 PSORS1C2 HLA-B GNL1 PRR3 NRM HCG8 TRIM40

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