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See other PRKCZ CNV Assays ›
Gene Symbol
PRKCZ
Assay Reference Genome
Location

Chr.1:2061020 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03330882_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5590

Gene Name:

 protein kinase C zeta

Gene Aliases:

 PKC-ZETA, PKC2

Location:

 Chr.1:2050470-2185395 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRKCZ NM_002744.4 NP_002735.3
XM_011541773.1 XP_011540075.1
XM_011541775.2 XP_011540077.1
XM_017001789.1 XP_016857278.1
XM_017001790.1 XP_016857279.1
XM_017001803.1 XP_016857292.1
AK290995.1
BC008058.2 AAH08058.1
BC014270.2 AAH14270.1
BT007082.1 AAP35745.1
L14283.1 AAA36488.1
Z15108.1 CAA78813.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951425 Chr.1:2018162 - 2112261 on Build GRCh38 Deletion PRKCZ GABRD LOC105378591
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss FAAP20 MTND2P28 PLEKHN1 GABRD LOC105378948 MTND1P23 ACAP3 MIR6726 LOC100132287 MMP23B LOC105378591 TNFRSF4 LOC100288069 TTLL10-AS1 LOC284600 ISG15 MIR200B LOC105378949 WASH7P SAMD11 HES4 LOC100287934 DVL1 LOC148413 CDK11A SKI MIB2 DDX11L1 FAM138A VWA1 MIR6808 TTLL10 SDF4 SCNN1D PERM1 LOC100288175 CFAP74 CDK11B LOC100506504 TNFRSF18 B3GALT6 LOC107985729 ATAD3C AURKAIP1 ANKRD65 FNDC10 MIR6859-1 FAM132A NOC2L UBE2J2 C1orf159 MIR6859-2 LINC00115 LOC101928626 MXRA8 MIR6723 LOC102724312 LINC01128 LOC100134822 LINC01342 LOC102725121 MRPL20 TMEM240 LOC100129534 LOC729737 OR4F29 CPTP AGRN TMEM52 OR4F16 CPSF3L LOC105378592 LOC105378947 ATAD3A SSU72 KLHL17 LOC107985728 MMP23A LOC107984841 CALML6 ATAD3B GNB1 MIR200A CCNL2 SLC35E2B MORN1 OR4F5 NADK MIR1302-2 FAM87B LOC105378589 SLC35E2 LOC100130417 PRKCZ FAM41C TMEM88B TAS1R3 PUSL1 LOC100133331 MIR429 RNF223 MIR6727
nsv834446 Chr.1:1960604 - 2156435 on Build GRCh38 Loss CFAP74 PRKCZ GABRD LOC105378589 LOC105378591
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss CALML6 ATAD3B LOC102724312 GABRD GNB1 CCNL2 SLC35E2B VWA1 NADK MMP23B LOC105378589 MRPL20 LOC105378591 TMEM240 CFAP74 SLC35E2 CDK11B PRKCZ LOC107985729 ATAD3C LOC105378949 ANKRD65 TMEM52 FNDC10 TMEM88B LOC148413 ATAD3A SSU72 CDK11A MIB2 MMP23A

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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