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Gene Symbol
PRKCZ
Assay Reference Genome
Location

Chr.1:2072097 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03348312_cn
Size
Availability Made To Order
Catalog # 4400291
Price 457.00
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Assay Details

Target Gene Details

Entrez Gene ID:

 5590

Gene Name:

 protein kinase C zeta

Gene Aliases:

 PKC-ZETA, PKC2

Location:

 Chr.1:2050470-2185395 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRKCZ NM_002744.4 NP_002735.3
XM_011541773.1 XP_011540075.1
XM_011541775.2 XP_011540077.1
XM_017001789.1 XP_016857278.1
XM_017001790.1 XP_016857279.1
XM_017001803.1 XP_016857292.1
AK290995.1
BC008058.2 AAH08058.1
BC014270.2 AAH14270.1
BT007082.1 AAP35745.1
L14283.1 AAA36488.1
Z15108.1 CAA78813.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951425 Chr.1:2018162 - 2112261 on Build GRCh38 Deletion GABRD PRKCZ LOC105378591
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss TTLL10-AS1 SLC35E2B SDF4 SSU72 MIB2 MIR6726 ATAD3B ISG15 MORN1 MXRA8 LINC00115 MIR6727 LOC105378948 LOC100130417 LOC100132287 GABRD KLHL17 TNFRSF4 AGRN LOC105378592 LOC100506504 LOC100129534 CPSF3L TMEM52 LOC284600 FNDC10 LOC105378949 LOC107985729 MMP23B CFAP74 TTLL10 HES4 NOC2L ACAP3 FAM138A FAM41C ATAD3A OR4F29 LOC105378591 LOC107984841 LOC101928626 FAM132A OR4F16 B3GALT6 SCNN1D LOC100133331 PERM1 CPTP LOC105378947 CALML6 PLEKHN1 LOC105378589 TMEM88B WASH7P DDX11L1 UBE2J2 SKI FAAP20 SAMD11 CDK11B ATAD3C LINC01128 MIR6859-2 LOC148413 MIR200B AURKAIP1 OR4F5 RNF223 TAS1R3 NADK LOC729737 PRKCZ GNB1 SLC35E2 LOC107985728 MTND2P28 LOC100134822 LOC100287934 CDK11A MIR1302-2 MIR200A MMP23A MIR6808 MRPL20 LOC100288175 LOC102725121 PUSL1 TMEM240 MIR6723 MTND1P23 C1orf159 FAM87B VWA1 LOC100288069 DVL1 TNFRSF18 LOC102724312 MIR6859-1 LINC01342 CCNL2 ANKRD65 MIR429
nsv834446 Chr.1:1960604 - 2156435 on Build GRCh38 Loss GABRD PRKCZ LOC105378589 CFAP74 LOC105378591
nsv2520 Chr.1:2063294 - 2089621 on Build GRCh38 Insertion PRKCZ
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss SLC35E2B MMP23A CDK11B ATAD3C ATAD3A SSU72 MRPL20 MIB2 LOC105378591 ATAD3B TMEM240 LOC148413 CALML6 GABRD LOC105378589 VWA1 NADK TMEM88B LOC102724312 TMEM52 FNDC10 PRKCZ LOC105378949 LOC107985729 CCNL2 MMP23B GNB1 CFAP74 SLC35E2 ANKRD65 CDK11A

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More Information


Additional Information:

For this assay, SNP(s) [rs74322154] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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