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Gene Symbol
FAAP20
Assay Reference Genome
Location

Chr.1:2192275 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03361621_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 199990

Gene Name:

 Fanconi anemia core complex associated protein 20

Gene Aliases:

 C1orf86, FP7162

Location:

 Chr.1:2184460-2212720 on Build GRCh38

Assay Gene Location:

 Within Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FAAP20 NM_001146310.1 NP_001139782.1
NM_001256945.1 NP_001243874.1
NM_001256946.1 4 1197 NP_001243875.1
NM_001256947.1 NP_001243876.1
NM_001282670.1 NP_001269599.1
NM_001282671.1 NP_001269600.1
NM_001282672.1 NP_001269601.1
NM_001282673.1 NP_001269602.1
NM_182533.2 NP_872339.2
NR_046427.1
XM_006710419.3 XP_006710482.1
XM_006710421.3 XP_006710484.1
XM_011540914.2 XP_011539216.1
XM_011540921.2 XP_011539223.1
XM_011540922.1 XP_011539224.1
XM_017000553.1 XP_016856042.1
XM_017000554.1 XP_016856043.1
XM_017000557.1 XP_016856046.1
AF461903.1 AAQ04817.1
AF469129.1 AAP97719.1
AK055593.1 BAB70965.1
AK125445.1 1 320
AK126870.1 BAC86730.1
AK127994.1 BAC87220.1
AK128507.1 1 1311
AL545931.3
BC066360.1 AAH66360.1
BC103992.2 AAI03993.1
BG825658.1
BM127377.1 1 384
BU192678.1
BU542153.1
BU626113.1
CN397640.1
DA596011.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv461727 Chr.1:2151050 - 2251031 on Build GRCh38 Loss FAAP20 LOC105378592 LOC100506504 SKI PRKCZ
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss B3GALT6 LOC100288069 DDX11L1 TNFRSF4 SKI NADK LOC107984841 LOC100506504 LINC01128 OR4F5 PERM1 VWA1 FNDC10 PUSL1 CDK11B MXRA8 LOC107985728 LOC105378947 MIR200B CPSF3L MIR6859-2 MIR200A FAM41C LOC148413 SLC35E2B GABRD SSU72 ANKRD65 CPTP MIR6859-1 TTLL10 MIR1302-2 WASH7P MIR6808 LOC100132287 LINC00115 SDF4 LOC102725121 CDK11A LOC100287934 CFAP74 MRPL20 TAS1R3 SAMD11 MIR6726 RNF223 AGRN LOC100288175 TMEM52 PRKCZ LOC105378949 MTND2P28 ACAP3 AURKAIP1 TTLL10-AS1 LOC105378591 MMP23A LOC105378589 PLEKHN1 CALML6 LOC100130417 MMP23B LOC101928626 MORN1 MIR429 MIR6723 FAM87B LOC729737 FAM138A LOC102724312 MIR6727 OR4F16 ATAD3C NOC2L SLC35E2 KLHL17 LOC107985729 MTND1P23 DVL1 HES4 ATAD3A SCNN1D LOC284600 TMEM88B ISG15 GNB1 C1orf159 LINC01342 LOC100133331 UBE2J2 TNFRSF18 OR4F29 FAAP20 FAM132A ATAD3B LOC100134822 MIB2 CCNL2 LOC105378948 LOC100129534 LOC105378592 TMEM240
nsv951530 Chr.1:2153662 - 2229961 on Build GRCh38 Deletion FAAP20 LOC105378592 LOC100506504 SKI PRKCZ
nsv470682 Chr.1:2188394 - 2378754 on Build GRCh38 Loss LOC100129534 FAAP20 MORN1 LOC105378592 SKI
nsv834557 Chr.1:2117631 - 2311104 on Build GRCh38 Loss FAAP20 LOC105378592 LOC100506504 SKI PRKCZ

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