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See other PRKCZ CNV Assays ›
Gene Symbol
PRKCZ
Assay Reference Genome
Location

Chr.1:2061976 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03362055_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5590

Gene Name:

 protein kinase C zeta

Gene Aliases:

 PKC-ZETA, PKC2

Location:

 Chr.1:2050470-2185395 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRKCZ NM_002744.4 NP_002735.3
XM_011541773.1 XP_011540075.1
XM_011541775.2 XP_011540077.1
XM_017001789.1 XP_016857278.1
XM_017001790.1 XP_016857279.1
XM_017001803.1 XP_016857292.1
AK290995.1
BC008058.2 AAH08058.1
BC014270.2 AAH14270.1
BT007082.1 AAP35745.1
L14283.1 AAA36488.1
Z15108.1 CAA78813.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951425 Chr.1:2018162 - 2112261 on Build GRCh38 Deletion LOC105378591 PRKCZ GABRD
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC100134822 PUSL1 LOC105378948 OR4F5 LOC100133331 FAM87B MXRA8 CCNL2 LOC100132287 SDF4 MMP23B LOC100129534 LOC100130417 MMP23A PERM1 TTLL10 CPSF3L MIR6727 LOC100288175 LINC00115 ISG15 MTND1P23 B3GALT6 TMEM52 ANKRD65 CALML6 LOC107985728 LOC105378949 FAM138A LOC105378947 LOC105378591 LOC100506504 LINC01128 LOC100287934 MIR200B TAS1R3 AURKAIP1 MIB2 SLC35E2 FAM132A MRPL20 ATAD3A MIR6723 PLEKHN1 LOC284600 LOC107985729 RNF223 SSU72 LOC105378589 LOC102725121 WASH7P VWA1 LOC101928626 ATAD3B TTLL10-AS1 LOC107984841 TMEM240 ACAP3 MIR6859-1 GNB1 LOC148413 UBE2J2 TMEM88B ATAD3C MORN1 FAM41C SAMD11 NOC2L DDX11L1 DVL1 LOC102724312 AGRN FAAP20 TNFRSF18 MIR6808 CDK11B C1orf159 PRKCZ OR4F16 LOC105378592 MIR1302-2 MIR429 CFAP74 CPTP LINC01342 SCNN1D MIR6859-2 CDK11A TNFRSF4 MIR200A GABRD SKI MTND2P28 MIR6726 NADK KLHL17 LOC100288069 LOC729737 SLC35E2B HES4 FNDC10 OR4F29
nsv834446 Chr.1:1960604 - 2156435 on Build GRCh38 Loss LOC105378591 PRKCZ CFAP74 GABRD LOC105378589
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss PRKCZ VWA1 TMEM52 ANKRD65 ATAD3B CALML6 LOC105378949 LOC105378591 TMEM240 CFAP74 CCNL2 MIB2 CDK11A MMP23B GNB1 SLC35E2 LOC148413 GABRD TMEM88B ATAD3C MRPL20 ATAD3A NADK MMP23A SLC35E2B LOC102724312 LOC107985729 FNDC10 SSU72 LOC105378589 CDK11B

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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