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See other PRKCZ CNV Assays ›
Gene Symbol
PRKCZ
Assay Reference Genome
Location

Chr.1:2068850 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03370119_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5590

Gene Name:

 protein kinase C zeta

Gene Aliases:

 PKC-ZETA, PKC2

Location:

 Chr.1:2050470-2185395 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRKCZ NM_002744.4 NP_002735.3
XM_011541773.1 XP_011540075.1
XM_011541775.2 XP_011540077.1
XM_017001789.1 XP_016857278.1
XM_017001790.1 XP_016857279.1
XM_017001803.1 XP_016857292.1
AK290995.1
BC008058.2 AAH08058.1
BC014270.2 AAH14270.1
BT007082.1 AAP35745.1
L14283.1 AAA36488.1
Z15108.1 CAA78813.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951425 Chr.1:2018162 - 2112261 on Build GRCh38 Deletion PRKCZ GABRD LOC105378591
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC100134822 SKI MIR6727 MIR6808 CDK11A ACAP3 CFAP74 FAM41C GABRD OR4F5 LOC107985729 MXRA8 UBE2J2 MTND1P23 MIR6859-2 ATAD3B LOC148413 MIR6859-1 MIR200B LOC100288175 FAAP20 MMP23A MIR200A CPTP MIR6726 MIB2 KLHL17 LOC100130417 SAMD11 LINC01128 PUSL1 VWA1 PLEKHN1 TMEM52 OR4F29 SDF4 LOC105378949 LOC105378592 TMEM88B TTLL10 MIR6723 MTND2P28 FAM132A LOC105378947 DDX11L1 TNFRSF4 SCNN1D LOC107985728 LOC100132287 NADK SSU72 MIR429 SLC35E2 TNFRSF18 B3GALT6 OR4F16 LINC00115 LOC101928626 ISG15 CDK11B LOC284600 LOC100133331 LOC105378589 DVL1 LOC729737 LOC100506504 LOC100129534 LOC102724312 FNDC10 FAM87B LOC105378591 TMEM240 LOC105378948 PRKCZ MORN1 MMP23B MIR1302-2 LINC01342 CPSF3L FAM138A ANKRD65 LOC102725121 LOC100287934 LOC107984841 PERM1 TAS1R3 GNB1 CCNL2 AURKAIP1 MRPL20 WASH7P ATAD3A HES4 NOC2L SLC35E2B TTLL10-AS1 ATAD3C AGRN RNF223 LOC100288069 C1orf159 CALML6
nsv834446 Chr.1:1960604 - 2156435 on Build GRCh38 Loss PRKCZ CFAP74 GABRD LOC105378589 LOC105378591
nsv2520 Chr.1:2063294 - 2089621 on Build GRCh38 Insertion PRKCZ
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss MIB2 NADK SSU72 ANKRD65 SLC35E2 CDK11A CFAP74 CDK11B GABRD LOC107985729 LOC105378589 GNB1 VWA1 CCNL2 MRPL20 ATAD3B LOC148413 ATAD3A LOC102724312 TMEM52 FNDC10 SLC35E2B LOC105378949 LOC105378591 ATAD3C TMEM240 PRKCZ TMEM88B MMP23A MMP23B CALML6

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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