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See other PRKCZ CNV Assays ›
Gene Symbol
PRKCZ
Assay Reference Genome
Location

Chr.1:2057374 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03370434_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5590

Gene Name:

 protein kinase C zeta

Gene Aliases:

 PKC-ZETA, PKC2

Location:

 Chr.1:2050470-2185395 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRKCZ NM_002744.4 NP_002735.3
XM_011541773.1 XP_011540075.1
XM_011541775.2 XP_011540077.1
XM_017001789.1 XP_016857278.1
XM_017001790.1 XP_016857279.1
XM_017001803.1 XP_016857292.1
AK290995.1
BC008058.2 AAH08058.1
BC014270.2 AAH14270.1
BT007082.1 AAP35745.1
L14283.1 AAA36488.1
Z15108.1 CAA78813.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951425 Chr.1:2018162 - 2112261 on Build GRCh38 Deletion LOC105378591 PRKCZ GABRD
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC100288175 LOC107984841 MIR6727 MTND1P23 MIR6808 MIR6726 MIR6723 LINC01342 LOC100130417 CDK11B CFAP74 LOC107985729 MIR200B LOC102725121 ACAP3 LOC100134822 OR4F29 TMEM240 SKI LOC100287934 TNFRSF4 GABRD MXRA8 LOC101928626 TMEM52 LOC105378592 ATAD3C PLEKHN1 MORN1 LOC102724312 MIR6859-2 ANKRD65 LOC284600 LINC01128 KLHL17 LOC100129534 CPTP SCNN1D CDK11A LOC105378591 LOC105378589 SLC35E2 NOC2L TTLL10-AS1 TMEM88B TAS1R3 FAM132A MRPL20 MMP23B LOC100506504 PUSL1 OR4F5 ISG15 CPSF3L MMP23A B3GALT6 MIR6859-1 VWA1 TTLL10 DVL1 ATAD3A MIR429 ATAD3B SSU72 SDF4 SAMD11 LOC105378947 CALML6 OR4F16 FAM87B FAM138A HES4 LOC105378949 FNDC10 LOC729737 LOC100132287 MTND2P28 AURKAIP1 PRKCZ DDX11L1 WASH7P NADK C1orf159 FAAP20 LOC107985728 FAM41C GNB1 LOC105378948 MIR200A TNFRSF18 UBE2J2 PERM1 LINC00115 SLC35E2B CCNL2 MIR1302-2 RNF223 MIB2 LOC100133331 AGRN LOC148413 LOC100288069
nsv834446 Chr.1:1960604 - 2156435 on Build GRCh38 Loss LOC105378589 CFAP74 LOC105378591 PRKCZ GABRD
nsv822920 Chr.1:2056828 - 2059117 on Build GRCh38 Gain PRKCZ
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss TMEM88B LOC105378949 LOC102724312 ANKRD65 FNDC10 MRPL20 MMP23B MMP23A PRKCZ CDK11B CFAP74 LOC107985729 NADK CDK11A LOC105378591 VWA1 GNB1 LOC105378589 TMEM240 SLC35E2 SLC35E2B ATAD3A CCNL2 ATAD3B SSU72 MIB2 GABRD CALML6 TMEM52 ATAD3C LOC148413

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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