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See other PDZK1 CNV Assays ›
Gene Symbol
PDZK1
Assay Reference Genome
Location

Chr.1:145697544 on build GRCh38
Cytoband
1q21.1
Assay ID Hs03371939_cn
Size
Availability Made To Order
Catalog # 4400291
Price 475.00
Your Price
Online offer: 441.65
441.65
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Assay Details

Target Gene Details

Entrez Gene ID:

 5174

Gene Name:

 PDZ domain containing 1

Gene Aliases:

 CAP70, CLAMP, NHERF-3, NHERF3, PDZD1

Location:

 Chr.1:145670852-145707507 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PDZK1 NM_001201325.1 NP_001188254.1
NM_001201326.1 NP_001188255.1
NM_002614.4 NP_002605.2
XM_011509618.2 XP_011507920.1
XM_017001467.1 XP_016856956.1
AF012281.1 AAC12264.1
AK298269.1
AK313100.1
BX477678.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss LOC101928979 CHD1L LOC728989 RNVU1-7 LOC101927468 MIR5087 MIR6077 PDZK1P1 RNVU1-3 RNVU1-6 GNRHR2 GJA8 NBPF13P NUDT4P1 NOTCH2NL LOC100996763 CH17-408M7.1 LINC00624 CD160 PDZK1 RNVU1-8 NBPF10 PRKAB2 RNVU1-1 ANKRD34A LOC105371226 ANKRD35 NUDT17 NBPF14 PDIA3P1 POLR3GL LOC100132057 MIR6736 POLR3C NBPF12 NBPF11 LOC284561 HYDIN2 GPR89B ACP6 PIAS3 GJA5 FMO5 LOC105371242 RNF115 RNU1-13P PDE4DIP LOC100996517 LIX1L BCL9 GPR89A LINC01138 LOC100505824 TXNIP PEX11B PPIAL4G NUDT4P2 RBM8A ITGA10 HFE2
esv3587421 Chr.1:145649153 - 145751059 on Build GRCh38 Loss RNF115 CD160 GPR89A PDZK1
esv3572342 Chr.1:145601946 - 145809476 on Build GRCh38 Gain RNF115 NBPF25P CD160 GPR89A PDZK1
nsv469752 Chr.1:145639438 - 145790042 on Build GRCh38 Loss RNF115 CD160 GPR89A PDZK1
nsv831392 Chr.1:145632374 - 145813165 on Build GRCh38 Gain RNF115 CD160 GPR89A PDZK1
esv3894089 Chr.1:145672100 - 145824903 on Build GRCh38 Loss RNF115 POLR3C CD160 PDZK1
nsv547670 Chr.1:145689573 - 145778504 on Build GRCh38 Loss RNF115 CD160 PDZK1
dgv532n54 Chr.1:145624561 - 145813526 on Build GRCh38 Gain RNF115 CD160 GPR89A PDZK1
dgv95e212 Chr.1:145631218 - 145812561 on Build GRCh38 Gain RNF115 CD160 GPR89A PDZK1
dgv33n27 Chr.1:145687602 - 145824903 on Build GRCh38 Loss RNF115 POLR3C CD160 PDZK1

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