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See other GJC2 CNV Assays ›
Gene Symbol
GJC2
Assay Reference Genome
Location

Chr.1:228155990 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03381198_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57165

Gene Name:

 gap junction protein gamma 2

Gene Aliases:

 CX46.6, Cx47, GJA12, HLD2, LMPH1C, PMLDAR, SPG44

Location:

 Chr.1:228149714-228159826 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GJC2 NM_020435.3 NP_065168.2
BC035840.1 AAH35840.1
BC089439.1 AAH89439.1
CF132637.1
EU433401.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv952137 Chr.1:228140600 - 228182899 on Build GRCh38 Deletion GJC2 IBA57 GUK1 IBA57-AS1
nsv1160102 Chr.1:228081212 - 228239280 on Build GRCh38 Deletion C1orf35 GJC2 IBA57 GUK1 IBA57-AS1 OBSCN ARF1 MIR3620 C1orf145 MRPL55
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain LOC107985355 GUK1 OBSCN LOC105373289 HIST3H2BB HIST3H2A PRSS38 ARF1 MIR4666A C1orf145 LOC101060022 LOC100506571 C1orf35 WNT9A IBA57 MIR6742 TRIM17 LOC101927401 MRPL55 MIR5008 SNAP47 TRIM11 GJC2 HIST3H3 RNF187 IBA57-AS1 JMJD4 WNT3A MIR3620
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain RNA5S8 RNA5S7 GUK1 LOC105373289 HIST3H2BB PRSS38 RNA5S15 RNA5S13 RNA5S9 MIR4666A LOC101060022 LOC100506571 C1orf35 WNT9A DUSP5P1 IBA57 TRIM17 LOC101927401 MRPL55 RNA5S5 SNAP47 TRIM11 LOC105373132 RNA5S4 MIR3620 RNA5S2 RHOU RNA5S10 RNA5S16 LOC107985355 OBSCN HIST3H2A RNA5S1 BTNL10 RNA5S12 RNA5S11 ARF1 C1orf145 RNA5S3 RNA5S6 MIR6742 RNA5S17 MIR5008 GJC2 HIST3H3 RNA5S14 RNF187 IBA57-AS1 JMJD4 WNT3A
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss IBA57 GUK1 OBSCN MIR6742 TRIM17 LOC101927401 HIST3H2BB HIST3H2A TRIM11 GJC2 HIST3H3 IBA57-AS1 MIR4666A C1orf145
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss LOC107985355 GUK1 OBSCN HIST3H2BB HIST3H2A ARF1 MIR4666A C1orf145 LOC101060022 LOC100506571 C1orf35 WNT9A IBA57 MIR6742 TRIM17 LOC101927401 MRPL55 MIR5008 TRIM11 GJC2 HIST3H3 RNF187 IBA57-AS1 WNT3A MIR3620
dgv839n54 Chr.1:228139958 - 228183397 on Build GRCh38 Loss GJC2 IBA57 GUK1 IBA57-AS1
nsv549291 Chr.1:228151238 - 228163073 on Build GRCh38 Loss GJC2
nsv549290 Chr.1:228145951 - 228162105 on Build GRCh38 Loss GJC2 GUK1

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

gap junction

Gene Ontology Categories:

Function(s) Process(es)


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