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See other ARHGEF4 CNV Assays ›
Gene Symbol
ARHGEF4
Assay Reference Genome
Location

Chr.2:130842541 on build GRCh38
Cytoband
2q21.1
Assay ID Hs03395309_cn
Size
Availability Made To Order
Catalog # 4400291
Price 457.00
Your Price
Online offer: 424.65
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Assay Details

Target Gene Details

Entrez Gene ID:

 50649

Gene Name:

 Rho guanine nucleotide exchange factor 4

Gene Aliases:

 ASEF, ASEF1, GEF4, STM6

Location:

 Chr.2:130836916-131047253 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ARHGEF4 XM_005263681.1 XP_005263738.1
XM_005263685.3 XP_005263742.1
XM_011511274.2 XP_011509576.1
XM_017004231.1 XP_016859720.1
AK127124.1

Target Gene Details

Entrez Gene ID:

 653269

Gene Name:

 POTE ankyrin domain family member I

Gene Aliases:

 POTE2beta

Location:

 Chr.2:130462245-131626428 on Build GRCh38

Assay Gene Location:
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
POTEI

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4074n100 Chr.2:130550793 - 131291209 on Build GRCh38 Gain AMER3 POTEE LOC440910 CYP4F30P TISP43 POTEI ARHGEF4 POTEJ PLEKHB2 FAM168B CFC1 GPR148
dgv731e199 Chr.2:130678437 - 131300107 on Build GRCh38 Deletion AMER3 POTEE LOC440910 CYP4F30P POTEI ARHGEF4 PLEKHB2 FAM168B GPR148
esv2670824 Chr.2:130625264 - 131605218 on Build GRCh38 Deletion POTEKP POTEE LOC440910 POTEI NOC2LP2 ARHGEF4 PLEKHB2 MIR4784 FAM168B MZT2A GPR148 WTH3DI AMER3 LOC150776 CCDC74A CYP4F30P TUBA3D POTEJ LINC01120
nsv583136 Chr.2:130730100 - 130846832 on Build GRCh38 Loss AMER3 POTEI ARHGEF4 GPR148
dgv4075n100 Chr.2:130720375 - 131521740 on Build GRCh38 Gain POTEE LOC440910 POTEI NOC2LP2 ARHGEF4 PLEKHB2 MIR4784 FAM168B MZT2A GPR148 WTH3DI AMER3 LOC150776 TUBA3D LINC01120
nsv2925 Chr.2:130841107 - 130887218 on Build GRCh38 Deletion POTEI ARHGEF4
esv3893337 Chr.2:130722838 - 131194387 on Build GRCh38 Loss AMER3 POTEI ARHGEF4 PLEKHB2 FAM168B GPR148
dgv616e201 Chr.2:130674635 - 131312550 on Build GRCh38 Deletion AMER3 POTEE LOC440910 CYP4F30P POTEI ARHGEF4 PLEKHB2 FAM168B GPR148
nsv583135 Chr.2:130724905 - 131194388 on Build GRCh38 Loss AMER3 POTEI ARHGEF4 PLEKHB2 FAM168B GPR148
nsv524021 Chr.2:130724906 - 131553515 on Build GRCh38 Loss POTEE LOC440910 POTEI NOC2LP2 ARHGEF4 PLEKHB2 MIR4784 FAM168B MZT2A GPR148 WTH3DI AMER3 LOC150776 CCDC74A TUBA3D LINC01120
esv2760576 Chr.2:130634172 - 131521752 on Build GRCh38 Gain+Loss POTEE LOC440910 POTEI NOC2LP2 ARHGEF4 PLEKHB2 MIR4784 FAM168B MZT2A GPR148 WTH3DI AMER3 LOC150776 CYP4F30P TUBA3D POTEJ LINC01120
esv2759092 Chr.2:129589265 - 132440430 on Build GRCh38 Gain+Loss POTEE LOC440910 IMP4 LOC646743 C2orf27A CCDC74B FAM168B GPR148 NOC2LP1 TUBA3E LOC150776 CCDC74A SMPD4 CYP4F62P NOC2LP2 FAR2P2 PTPN18 LOC101927924 ANKRD30BL TISP43 TUBA3D LOC107985778 POTEJ LOC389033 LINC01120 GPR39 POTEI MIR663B MIR4784 LINC01087 CFC1B WTH3DI FAR2P1 C2orf27B FAM201B RAB6C POTEF CCDC115 ZNF806 POTEKP MED15P9 MZT2B ARHGEF4 PLEKHB2 MZT2A AMER3 CYP4F30P LOC100507460 CFC1 RAB6C-AS1
nsv523500 Chr.2:130835472 - 130853759 on Build GRCh38 Loss POTEI ARHGEF4
nsv428403 Chr.2:129818076 - 130882067 on Build GRCh38 Loss POTEI IMP4 LOC646743 CCDC74B GPR148 CFC1B NOC2LP1 TUBA3E FAR2P1 SMPD4 RAB6C POTEF CCDC115 CYP4F62P MED15P9 MZT2B ARHGEF4 FAR2P2 PTPN18 LOC101927924 AMER3 CYP4F30P TISP43 LOC107985778 POTEJ LOC389033 CFC1 RAB6C-AS1

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More Information


Additional Information:

For this assay, SNP(s) [rs78882055] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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