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See other PCYT1A CNV Assays ›
Gene Symbol
PCYT1A
Assay Reference Genome
Location

Chr.3:196239286 on build GRCh38
Cytoband
3q29
Assay ID Hs03488339_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5130

Gene Name:

 phosphate cytidylyltransferase 1, choline, alpha

Gene Aliases:

 CCTA, CT, CTA, CTPCT, PCYT1, SMDCRD

Location:

 Chr.3:196237745-196287752 on Build GRCh38

Assay Gene Location:

 Within Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PCYT1A NM_001312673.1 NP_001299602.1
NM_005017.3 NP_005008.2
AK304534.1
AK313450.1
BC046355.1 AAH46355.1
L28957.1 AAA72127.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3599278 Chr.3:196229547 - 196249176 on Build GRCh38 Gain SLC51A PCYT1A
nsv997797 Chr.3:195931489 - 196486087 on Build GRCh38 Gain SDHAP1 TCTEX1D2 RNF168 ZDHHC19 TM4SF19 LOC105374301 TFRC SLC51A UBXN7 PCYT1A TM4SF19-TCTEX1D2 LINC00885 UBXN7-AS1 TM4SF19-AS1
esv3599276 Chr.3:196227560 - 196295937 on Build GRCh38 Loss TCTEX1D2 SLC51A PCYT1A
nsv1009811 Chr.3:196124925 - 196411200 on Build GRCh38 Gain TM4SF19 TCTEX1D2 SLC51A UBXN7 PCYT1A TM4SF19-TCTEX1D2 LINC00885 ZDHHC19 TM4SF19-AS1
nsv593071 Chr.3:196132016 - 196345571 on Build GRCh38 Gain TM4SF19 TCTEX1D2 SLC51A PCYT1A TM4SF19-TCTEX1D2 LINC00885 ZDHHC19 TM4SF19-AS1
nsv1008512 Chr.3:195982791 - 196248065 on Build GRCh38 Gain LOC105374301 TFRC SDHAP1 SLC51A PCYT1A LINC00885 ZDHHC19
esv2759213 Chr.3:195382058 - 196344722 on Build GRCh38 Gain+Loss MUC4 SDHAP1 TCTEX1D2 PPP1R2 SDHAP2 ZDHHC19 LOC105374297 LINC00969 TNK2 APOD TM4SF19 LOC105374301 TFRC SLC51A MIR570 PCYT1A TM4SF19-TCTEX1D2 LOC101929697 LINC00885 MUC20 LOC105374299 MIR6829 TM4SF19-AS1 ACAP2

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