Name: [Hs03492347_cn] [PCYT1A]
Creator: Thermo Fisher Scientific
Keywords: [PCYT1A] Assay, [phosphate cytidylyltransferase 1, choline, alpha] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	5130
Gene Name:	phosphate cytidylyltransferase 1, choline, alpha
Gene Aliases:	CCTA, CT, CTA, CTPCT, PCYT1, SMDCRD
Location:	Chr.3:196237745-196287752 on Build GRCh38
Assay Gene Location:	Within Intron 6

Gene Symbol	Transcript Accession	Protein ID
PCYT1A	NM_001312673.1	NP_001299602.1
	NM_005017.3	NP_005008.2
	AK304534.1
	AK309073.1
	AK309300.1
	AK313450.1
	BC046355.1	AAH46355.1
	L28957.1	AAA72127.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3599278	Chr.3:196229547 - 196249176 on Build GRCh38	Gain	PCYT1A SLC51A
nsv997797	Chr.3:195931489 - 196486087 on Build GRCh38	Gain	UBXN7-AS1 LINC00885 SDHAP1 TM4SF19-TCTEX1D2 TFRC PCYT1A TCTEX1D2 UBXN7 LOC105374301 TM4SF19 ZDHHC19 TM4SF19-AS1 RNF168 SLC51A
esv3599276	Chr.3:196227560 - 196295937 on Build GRCh38	Loss	TCTEX1D2 PCYT1A SLC51A
nsv1009811	Chr.3:196124925 - 196411200 on Build GRCh38	Gain	TCTEX1D2 UBXN7 LINC00885 TM4SF19-TCTEX1D2 TM4SF19 ZDHHC19 TM4SF19-AS1 PCYT1A SLC51A
nsv593071	Chr.3:196132016 - 196345571 on Build GRCh38	Gain	TCTEX1D2 LINC00885 TM4SF19-TCTEX1D2 TM4SF19 ZDHHC19 TM4SF19-AS1 PCYT1A SLC51A
nsv1008512	Chr.3:195982791 - 196248065 on Build GRCh38	Gain	LINC00885 SDHAP1 LOC105374301 ZDHHC19 TFRC PCYT1A SLC51A
esv2759213	Chr.3:195382058 - 196344722 on Build GRCh38	Gain+Loss	TNK2 LINC00885 SDHAP1 ACAP2 APOD TM4SF19-TCTEX1D2 SDHAP2 TFRC PCYT1A LINC00969 MIR6829 TCTEX1D2 LOC105374299 LOC105374297 LOC101929697 LOC105374301 MUC20 TM4SF19 MIR570 ZDHHC19 TM4SF19-AS1 MUC4 PPP1R2 SLC51A