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System Message

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Gene Symbol: TMEM175
Assay Reference Genome Location: Chr.4:947437 on build GRCh38
Cytoband: 4p16.3

Assay ID

Hs03540052_cn

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Catalog #	4400291
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Genomic Map
Assay Details
More Information

Assay Details

Target Gene Details

Entrez Gene ID:	84286
Gene Name:	transmembrane protein 175
Gene Aliases:	hTMEM175
Location:	Chr.4:932387-958656 on Build GRCh38
Assay Gene Location:	Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM175	NM_001297423.1			NP_001284352.1
	NM_001297424.1			NP_001284353.1
	NM_001297425.1			NP_001284354.1
	NM_001297426.1			NP_001284355.1
	NM_001297427.1			NP_001284356.1
	NM_001297428.1			NP_001284357.1
	NM_032326.3			NP_115702.1
	XM_005272301.2			XP_005272358.1
	XM_005272303.4			XP_005272360.1
	XM_005272304.1			XP_005272361.1
	XM_005272307.4			XP_005272364.1
	XM_017008701.1			XP_016864190.1
	XM_017008703.1			XP_016864192.1
	XM_017008704.1			XP_016864193.1
	AK090848.1
	AK293641.1
	AK309132.1
	AL834199.1			CAD38888.1
	BC005158.2			AAH05158.1
	BI819231.1
	CB992640.1
	CF242841.1
	DA168151.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1003219	Chr.4:776106 - 1111676 on Build GRCh38	Gain	RNF212 CPLX1 TMEM175 IDUA GAK FGFRL1 LOC100129917 DGKQ SLC26A1
nsv822425	Chr.4:546316 - 1420011 on Build GRCh38	Loss	ATP5I LOC107986211 SPON2 UVSSA CPLX1 PDE6B CTBP1-AS2 LOC100130872 GAK LOC101928521 TMED11P MFSD7 PCGF3 CTBP1-AS TMEM175 NKX1-1 FGFRL1 LOC100129917 CRIPAK DGKQ LOC101928548 SLC26A1 RNF212 MAEA LOC105374344 CTBP1 IDUA MYL5
nsv950327	Chr.4:945913 - 978512 on Build GRCh38	Deletion	TMEM175 DGKQ
dgv5079n100	Chr.4:843485 - 970603 on Build GRCh38	Gain	TMEM175 GAK DGKQ
esv29984	Chr.4:857569 - 970571 on Build GRCh38	Loss	TMEM175 GAK DGKQ
nsv469998	Chr.4:815805 - 1093743 on Build GRCh38	Loss	RNF212 CPLX1 TMEM175 IDUA GAK FGFRL1 DGKQ SLC26A1
nsv1008352	Chr.4:819605 - 1041628 on Build GRCh38	Gain	CPLX1 TMEM175 IDUA GAK FGFRL1 DGKQ SLC26A1

More Information

Set Membership:

Intragenic

Intronic

Non-exonic

DGV Variation

Panther Classification:

Molecular Function -

Gene Ontology Categories:

Function(s) Process(es)

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