Genomic Map
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Target Gene Details
Entrez Gene ID: | 10399 |
Gene Name: | receptor for activated C kinase 1 |
Gene Aliases: |
GNB2L1, Gnb2-rs1, H12.3, HLC-7, PIG21 |
Location: |
Chr.5:181236928-181243906 on Build GRCh38 |
Assay Gene Location: | Within Intron 7 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| RACK1 | NM_006098.4 | NP_006089.1 | ||
| AK095666.1 | ||||
| AK222488.1 | BAD96208.1 | |||
| AK301468.1 | ||||
| AY336089.1 | AAR24619.1 | |||
| BC000214.1 | AAH00214.1 | |||
| BC000366.2 | AAH00366.1 | |||
| BC010119.2 | AAH10119.1 | |||
| BC014256.1 | AAH14256.1 | |||
| BC014788.1 | AAH14788.1 | |||
| BC017287.2 | AAH17287.1 | |||
| BC019093.2 | AAH19093.1 | |||
| BC019362.1 | AAH19362.1 | |||
| BC021993.1 | AAH21993.1 | |||
| BC032006.1 | AAH32006.1 | |||
| CR456978.1 | CAG33259.1 | |||
| CR541909.1 | CAG46707.1 | |||
| GU727632.1 | ||||
| M24194.1 | AAA59626.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv1028730 | Chr.5:181236035 - 181292789 on Build GRCh38 | Gain |
 CTC-338M12.4
RACK1
TRIM52-AS1
SNORD96A
TRIM52
SNORD95
|
| nsv428133 | Chr.5:180805451 - 181359487 on Build GRCh38 | Gain |
CTC-338M12.4
LOC102577426
RACK1
MIR4638
TRIM7
SNORD95
HEIH
BTNL3
OR2V1
BTNL9
OR2V2
LINC00847
TRIM41
TRIM52-AS1
LOC100132062
SNORD96A
TRIM52
ZFP62
OR4F3
BTNL8
MIR8089
MGAT1
|
| nsv462591 | Chr.5:181195615 - 181263936 on Build GRCh38 | Loss |
CTC-338M12.4
RACK1
MIR4638
TRIM7
TRIM41
TRIM52-AS1
SNORD96A
TRIM52
SNORD95
|
| nsv830567 | Chr.5:181103365 - 181255322 on Build GRCh38 | Loss |
CTC-338M12.4
OR2V1
LOC102577426
RACK1
MIR4638
TRIM7
OR2V2
TRIM41
SNORD96A
TRIM52
SNORD95
|
| nsv517697 | Chr.5:181180883 - 181263936 on Build GRCh38 | Loss |
CTC-338M12.4
LOC102577426
RACK1
MIR4638
TRIM7
TRIM41
TRIM52-AS1
SNORD96A
TRIM52
SNORD95
|
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Additional Information:
For this assay, SNP(s) [rs73365987] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Gene Ontology Categories:
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