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See other PDCD6 CNV Assays ›
Gene Symbol
PDCD6
Assay Reference Genome
Location

Chr.5:279151 on build GRCh38
Cytoband
5p15.33
Assay ID Hs03574535_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 10016

Gene Name:

 programmed cell death 6

Gene Aliases:

 ALG-2, ALG2, PEF1B

Location:

 Chr.5:271621-314974 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PDCD6 NM_001267556.1 NP_001254485.1
NM_001267557.1 NP_001254486.1
NM_001267558.1 NP_001254487.1
NM_001267559.1 NP_001254488.1
NM_013232.3 NP_037364.1
AF035606.1 AAC27697.1
AK001917.1
AK024175.1
AK223366.1 BAD97086.1
AK295082.1
AK308872.1
AK315370.1
BC012384.1 AAH12384.1
BC106706.2 AAI06707.1
BC110291.1 AAI10292.1
BG390506.1
BI553617.1
BT020072.1 AAV38875.1
CR983268.1
DB495449.1
U58773.1 AAF14336.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759315 Chr.5:17263 - 595840 on Build GRCh38 Loss EXOC3-AS1 PDCD6 EXOC3 LOC100288152 PLEKHG4B SDHA HRAT5 LRRC14B SLC9A3 PP7080 CCDC127 AHRR MIR4456
esv3894107 Chr.5:81322 - 801057 on Build GRCh38 Gain EXOC3-AS1 PDCD6 EXOC3 LOC100288152 PLEKHG4B SDHA HRAT5 LRRC14B SLC9A3 PP7080 CCDC127 TPPP ZDHHC11 AHRR MIR4456 ZDHHC11B LOC101929895 CEP72 LOC100996325
nsv428458 Chr.5:93781 - 338972 on Build GRCh38 Loss PDCD6 AHRR PLEKHG4B SDHA HRAT5 LRRC14B CCDC127
esv2752083 Chr.5:28951 - 346521 on Build GRCh38 Gain PDCD6 AHRR PLEKHG4B SDHA HRAT5 LRRC14B CCDC127
nsv518607 Chr.5:141544 - 305917 on Build GRCh38 Gain PDCD6 AHRR PLEKHG4B SDHA HRAT5 LRRC14B CCDC127
nsv980603 Chr.5:272136 - 295286 on Build GRCh38 Duplication PDCD6
nsv1030767 Chr.5:154674 - 457840 on Build GRCh38 Gain EXOC3-AS1 PDCD6 AHRR EXOC3 PLEKHG4B SDHA HRAT5 LRRC14B CCDC127

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