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See other PPT2-EGFL8 CNV Assays ›
Gene Symbol
PPT2-EGFL8
Assay Reference Genome
Location

Chr.6:32164025 on build GRCh38
Cytoband
6p21.32
Assay ID Hs03591432_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 100532746

Gene Name:

 PPT2-EGFL8 readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.6:32153999-32168285 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPT2-EGFL8 NR_037861.1
AB209572.1 BAD92809.1
AF020544.1 AAB80731.1
AK290473.1
AK296648.1
AK307427.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830629 Chr.6:32076201 - 32222010 on Build GRCh38 Loss PPT2 PBX2 LOC100507547 AGPAT1 TNXB MIR6833 FKBPL GPSM3 PRRT1 ATF6B MIR6721 NOTCH4 RNF5 AGER EGFL8 PPT2-EGFL8
dgv10472n54 Chr.6:31985690 - 32812026 on Build GRCh38 Loss CYP21A2 PPT2 LOC100507547 HLA-DRB6 HLA-DQB2 C4B TNXB GPSM3 CYP21A1P PRRT1 HLA-DRA MIR6721 C4A NOTCH4 HLA-DRB1 AGER MIR3135B PBX2 HLA-DRB5 TNXA BTNL2 AGPAT1 HLA-DQB1-AS1 C6orf10 MIR6833 FKBPL HLA-DQA2 HLA-DQB1 ATF6B RNF5 HLA-DQA1 LOC101929163 HCG23 EGFL8 PPT2-EGFL8
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss CYP21A2 PPT2 LOC100507547 GPSM3 SNORD52 CYP21A1P C6orf48 NEU1 ZBTB12 MIR6721 C4A NOTCH4 HLA-DRB1 SLC44A4 STK19 PBX2 HLA-DRB5 TNXA BTNL2 FKBPL HLA-DQB1 C2 SNORD48 EHMT2 HLA-DRB6 C4B TNXB PRRT1 HLA-DRA DXO C2-AS1 AGER HSPA1A HSPA1B NELFE AGPAT1 HLA-DQB1-AS1 C6orf10 MIR6833 MIR1236 CFB ATF6B RNF5 HLA-DQA1 LOC101929163 SKIV2L HCG23 EGFL8 PPT2-EGFL8
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss CYP21A2 PPT2 LOC100507547 C4B TNXB GPSM3 CYP21A1P PRRT1 DXO MIR6721 C4A NOTCH4 C2-AS1 AGER STK19 PBX2 NELFE TNXA AGPAT1 MIR6833 FKBPL MIR1236 CFB ATF6B RNF5 C2 SKIV2L EGFL8 PPT2-EGFL8
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion CYP21A2 LY6G6F PPT2 CLIC1 MIR4646 LOC100507547 GPSM3 SNORD52 CYP21A1P C6orf48 NEU1 ZBTB12 MIR6832 MIR6721 PRRC2A C4A SAPCD1-AS1 NOTCH4 HLA-DRB1 LY6G5B MCCD1 LY6G6C C6orf47 SLC44A4 LY6G6E STK19 MICB BAG6 PBX2 LTA HLA-DRB5 TNXA BTNL2 HCP5 C6orf25 FKBPL DDX39B LOC100287329 VWA7 ABHD16A MSH5-SAPCD1 SNORD84 GPANK1 LTB ATP6V1G2-DDX39B C2 LSM2 LOC102725068 SNORD117 TNF SNORD48 SNORA38 EHMT2 HLA-DRB6 C4B TNXB CSNK2B PRRT1 HSPA1L HLA-DRA VARS DXO LY6G6D ATP6V1G2 C2-AS1 SAPCD1 HCG26 AGER MSH5 HSPA1A NFKBIL1 HSPA1B NELFE AGPAT1 NCR3 C6orf10 LST1 APOM MIR6833 MIR1236 CFB ATF6B DDAH2 RNF5 DDX39B-AS1 LOC101929163 LY6G5C SKIV2L HCG23 EGFL8 AIF1 PPT2-EGFL8
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion LY6G6F CLIC1 MIR4646 BRD2 PPP1R2P1 SNORD52 MIR5004 C6orf48 NEU1 ZBTB12 MIR6832 C4A SAPCD1-AS1 RPS18 NOTCH4 ZBTB22 TAPBP HLA-DOA LY6G6C C6orf47 STK19 MICB BAG6 SYNGAP1 TNXA HLA-DMA MIR6873 HCG25 HLA-DQA2 DDX39B ABHD16A MSH5-SAPCD1 HLA-DQB1 LTB ATP6V1G2-DDX39B C2 SLC39A7 SNORD48 WDR46 RGL2 PHF1 EHMT2 C4B TNXB PRRT1 HLA-DRA VARS RXRB LY6G6D HSD17B8 DAXX AGER MSH5 HSPA1A NFKBIL1 HSPA1B MIR219A1 AGPAT1 NCR3 C6orf10 MIR6833 COL11A2 HLA-DPB1 DDAH2 RNF5 HLA-DQA1 DDX39B-AS1 HCG24 TAP2 HCG23 AIF1 CYP21A2 PPT2 MIR6834 LOC100507547 CUTA RING1 GPSM3 CYP21A1P MIR6721 PRRC2A HLA-DRB1 PSMB9 LY6G5B MCCD1 SLC44A4 LY6G6E MIR3135B PBX2 LTA HLA-DRB5 BTNL2 KIFC1 HCP5 C6orf25 FKBPL LOC100287329 PFDN6 VWA7 SNORD84 GPANK1 LSM2 LOC102725068 SNORD117 TNF LOC100294145 SNORA38 PSMB8-AS1 B3GALT4 HLA-DRB6 VPS52 HLA-DQB2 CSNK2B HSPA1L DXO ATP6V1G2 C2-AS1 SAPCD1 HCG26 HLA-DMB NELFE HLA-DQB1-AS1 TAP1 LST1 APOM PSMB8 MIR1236 ZBTB9 CFB HLA-DPB2 ATF6B HLA-DPA1 HLA-DOB LOC101929163 LY6G5C SKIV2L EGFL8 PPT2-EGFL8
nsv602104 Chr.6:32096949 - 32203906 on Build GRCh38 Loss PPT2 PBX2 LOC100507547 AGPAT1 TNXB MIR6833 FKBPL GPSM3 PRRT1 ATF6B MIR6721 NOTCH4 RNF5 AGER EGFL8 PPT2-EGFL8
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion LY6G6F CLIC1 MIR4646 BRD2 PPP1R2P1 SNORD52 MIR5004 C6orf48 NEU1 ZBTB12 MIR6832 C4A SAPCD1-AS1 RPS18 NOTCH4 ZBTB22 TAPBP HLA-DOA LY6G6C C6orf47 STK19 MICB BAG6 SYNGAP1 TNXA HLA-DMA MIR6873 HCG25 HLA-DQA2 DDX39B ABHD16A MSH5-SAPCD1 HLA-DQB1 LTB ATP6V1G2-DDX39B C2 SLC39A7 SNORD48 WDR46 RGL2 PHF1 EHMT2 C4B TNXB PRRT1 HLA-DRA VARS RXRB LY6G6D HSD17B8 DAXX AGER MSH5 HSPA1A NFKBIL1 HSPA1B MIR219A1 AGPAT1 NCR3 C6orf10 MIR6833 COL11A2 HLA-DPB1 DDAH2 RNF5 HLA-DQA1 DDX39B-AS1 HCG24 TAP2 HCG23 AIF1 CYP21A2 PPT2 MIR6834 LOC100507547 CUTA RING1 GPSM3 CYP21A1P MIR6721 PRRC2A HLA-DRB1 PSMB9 LY6G5B MCCD1 SLC44A4 LY6G6E MIR3135B PBX2 LTA HLA-DRB5 BTNL2 KIFC1 HCP5 C6orf25 FKBPL LOC100287329 PFDN6 VWA7 SNORD84 GPANK1 LSM2 LOC102725068 SNORD117 TNF LOC100294145 SNORA38 PSMB8-AS1 B3GALT4 HLA-DRB6 VPS52 HLA-DQB2 CSNK2B HSPA1L DXO ATP6V1G2 C2-AS1 SAPCD1 HCG26 HLA-DMB NELFE HLA-DQB1-AS1 TAP1 LST1 APOM PSMB8 MIR1236 ZBTB9 CFB HLA-DPB2 ATF6B HLA-DPA1 HLA-DOB LOC101929163 LY6G5C SKIV2L EGFL8 PPT2-EGFL8
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss CYP21A2 LY6G6F PPT2 CLIC1 MIR4646 LOC100507547 GPSM3 SNORD52 CYP21A1P C6orf48 NEU1 ZBTB12 MIR6832 MIR6721 PRRC2A C4A SAPCD1-AS1 NOTCH4 LY6G5B MCCD1 LY6G6C C6orf47 SLC44A4 LY6G6E STK19 MICB BAG6 PBX2 LTA TNXA MICA BTNL2 HLA-B HCP5 C6orf25 FKBPL DDX39B MIR6891 LOC100287329 VWA7 ABHD16A MSH5-SAPCD1 SNORD84 GPANK1 LTB ATP6V1G2-DDX39B C2 LSM2 LOC102725068 SNORD117 TNF SNORD48 SNORA38 EHMT2 C4B TNXB CSNK2B PRRT1 HSPA1L HLA-DRA VARS DXO LY6G6D ATP6V1G2 C2-AS1 SAPCD1 HCG26 AGER MSH5 HSPA1A NFKBIL1 HSPA1B NELFE AGPAT1 NCR3 C6orf10 LST1 APOM MIR6833 MIR1236 CFB ATF6B DDAH2 RNF5 DDX39B-AS1 LOC101929163 LY6G5C SKIV2L HCG23 EGFL8 AIF1 PPT2-EGFL8

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:


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