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See other C2 CNV Assays ›
Gene Symbol
C2
Assay Reference Genome
Location

Chr.6:31903848 on build GRCh38
Cytoband
6p21.33
Assay ID Hs03595057_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 717

Gene Name:

 complement component 2

Gene Aliases:

 ARMD14, CO2

Location:

 Chr.6:31897785-31945674 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C2 NM_001178063.2 NP_001171534.1
NM_001282457.1 NP_001269386.1
AK096258.1
AK298311.1
AK298808.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv601960 Chr.6:31870664 - 31939370 on Build GRCh38 Loss SLC44A4 ZBTB12 C2-AS1 EHMT2 C2
nsv823505 Chr.6:31903462 - 31907392 on Build GRCh38 Loss C2
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion HLA-DQA2 HCP5 ZBTB12 MICB LY6G6E C6orf10 MIR5004 APOM STK19 PBX2 SAPCD1-AS1 LOC100507547 LY6G5B HLA-DQA1 TAP1 ATP6V1G2 MIR219A1 PSMB8-AS1 HLA-DMB CYP21A1P LTA MIR1236 NOTCH4 HLA-DRB1 HLA-DQB2 LOC100294145 RNF5 MIR6873 MIR3135B LTB NFKBIL1 CFB CSNK2B HLA-DPA1 VPS52 WDR46 GPANK1 TNXA HLA-DRA SLC44A4 DAXX RING1 AIF1 PRRC2A MSH5-SAPCD1 RGL2 DDX39B-AS1 MIR6834 SLC39A7 ZBTB9 HLA-DRB5 C4B COL11A2 KIFC1 SYNGAP1 LOC101929163 CLIC1 MIR6833 RXRB SKIV2L HCG25 HCG23 VARS AGPAT1 AGER PRRT1 PPP1R2P1 CYP21A2 HSPA1L ABHD16A HLA-DPB2 MIR6832 NCR3 HLA-DOB NEU1 SNORD84 EHMT2 DXO PSMB8 TNXB HSPA1A DDAH2 LY6G5C GPSM3 TAP2 BRD2 SAPCD1 HLA-DMA BTNL2 LY6G6F VWA7 BAG6 HLA-DOA C2-AS1 MCCD1 PFDN6 C6orf47 SNORD117 HSPA1B SNORD48 HLA-DQB1-AS1 MIR6721 HSD17B8 C4A LOC102725068 HCG26 LY6G6C PHF1 SNORD52 SNORA38 HCG24 PPT2-EGFL8 MIR4646 NELFE FKBPL C2 ATP6V1G2-DDX39B EGFL8 LSM2 PPT2 C6orf25 TAPBP HLA-DRB6 CUTA HLA-DPB1 LST1 TNF HLA-DQB1 MSH5 RPS18 PSMB9 LY6G6D ATF6B DDX39B ZBTB22 LOC100287329 B3GALT4 C6orf48
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss TNXB HSPA1A DDAH2 LY6G5C GPSM3 HCP5 ZBTB12 MICB LY6G6E C6orf10 APOM STK19 PBX2 SAPCD1-AS1 LOC100507547 MICA SAPCD1 LY6G5B ATP6V1G2 BTNL2 LY6G6F MIR6891 VWA7 CYP21A1P LTA BAG6 MIR1236 NOTCH4 RNF5 C2-AS1 MCCD1 LTB NFKBIL1 CFB CSNK2B C6orf47 GPANK1 SNORD117 TNXA HSPA1B HLA-DRA SNORD48 SLC44A4 AIF1 PRRC2A MIR6721 MSH5-SAPCD1 C4A LOC102725068 HCG26 DDX39B-AS1 LY6G6C SNORD52 C4B SNORA38 PPT2-EGFL8 MIR4646 NELFE LOC101929163 FKBPL C2 ATP6V1G2-DDX39B EGFL8 LSM2 CLIC1 MIR6833 PPT2 C6orf25 LST1 TNF SKIV2L HCG23 VARS MSH5 AGPAT1 HLA-B AGER PRRT1 CYP21A2 LY6G6D HSPA1L ATF6B DDX39B ABHD16A MIR6832 NCR3 LOC100287329 NEU1 SNORD84 EHMT2 C6orf48 DXO
esv3567540 Chr.6:31903367 - 31911043 on Build GRCh38 Deletion C2
esv3608572 Chr.6:31903347 - 31910697 on Build GRCh38 Loss C2
nsv10822 Chr.6:31898992 - 31903913 on Build GRCh38 Gain ZBTB12 C2
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss TNXB HSPA1A GPSM3 ZBTB12 C6orf10 STK19 PBX2 LOC100507547 HLA-DQA1 BTNL2 CYP21A1P MIR1236 NOTCH4 HLA-DRB1 RNF5 C2-AS1 CFB TNXA HSPA1B HLA-DRA SNORD48 SLC44A4 HLA-DQB1-AS1 MIR6721 C4A SNORD52 HLA-DRB5 C4B PPT2-EGFL8 NELFE LOC101929163 FKBPL C2 EGFL8 MIR6833 PPT2 HLA-DRB6 SKIV2L HLA-DQB1 HCG23 AGPAT1 AGER PRRT1 CYP21A2 ATF6B NEU1 EHMT2 C6orf48 DXO
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss TNXB GPSM3 C4B PPT2-EGFL8 STK19 NELFE PBX2 FKBPL C2 EGFL8 LOC100507547 MIR6833 PPT2 SKIV2L CYP21A1P AGPAT1 AGER MIR1236 NOTCH4 RNF5 C2-AS1 CFB PRRT1 CYP21A2 ATF6B TNXA MIR6721 DXO C4A
esv2731824 Chr.6:31903427 - 31911207 on Build GRCh38 Deletion C2
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion TNXB HSPA1A DDAH2 LY6G5C GPSM3 HCP5 ZBTB12 MICB LY6G6E C6orf10 APOM STK19 PBX2 SAPCD1-AS1 LOC100507547 SAPCD1 LY6G5B ATP6V1G2 BTNL2 LY6G6F VWA7 CYP21A1P LTA BAG6 MIR1236 NOTCH4 HLA-DRB1 RNF5 C2-AS1 MCCD1 LTB NFKBIL1 CFB CSNK2B C6orf47 GPANK1 SNORD117 TNXA HSPA1B HLA-DRA SNORD48 SLC44A4 AIF1 PRRC2A MIR6721 MSH5-SAPCD1 C4A LOC102725068 HCG26 DDX39B-AS1 LY6G6C SNORD52 HLA-DRB5 C4B SNORA38 PPT2-EGFL8 MIR4646 NELFE LOC101929163 FKBPL C2 ATP6V1G2-DDX39B EGFL8 LSM2 CLIC1 MIR6833 PPT2 C6orf25 HLA-DRB6 LST1 TNF SKIV2L HCG23 VARS MSH5 AGPAT1 AGER PRRT1 CYP21A2 LY6G6D HSPA1L ATF6B DDX39B ABHD16A MIR6832 NCR3 LOC100287329 NEU1 SNORD84 EHMT2 C6orf48 DXO
nsv10823 Chr.6:31903219 - 31912449 on Build GRCh38 Loss C2
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion HLA-DQA2 HCP5 ZBTB12 MICB LY6G6E C6orf10 MIR5004 APOM STK19 PBX2 SAPCD1-AS1 LOC100507547 LY6G5B HLA-DQA1 TAP1 ATP6V1G2 MIR219A1 PSMB8-AS1 HLA-DMB CYP21A1P LTA MIR1236 NOTCH4 HLA-DRB1 HLA-DQB2 LOC100294145 RNF5 MIR6873 MIR3135B LTB NFKBIL1 CFB CSNK2B HLA-DPA1 VPS52 WDR46 GPANK1 TNXA HLA-DRA SLC44A4 DAXX RING1 AIF1 PRRC2A MSH5-SAPCD1 RGL2 DDX39B-AS1 MIR6834 SLC39A7 ZBTB9 HLA-DRB5 C4B COL11A2 KIFC1 SYNGAP1 LOC101929163 CLIC1 MIR6833 RXRB SKIV2L HCG25 HCG23 VARS AGPAT1 AGER PRRT1 PPP1R2P1 CYP21A2 HSPA1L ABHD16A HLA-DPB2 MIR6832 NCR3 HLA-DOB NEU1 SNORD84 EHMT2 DXO PSMB8 TNXB HSPA1A DDAH2 LY6G5C GPSM3 TAP2 BRD2 SAPCD1 HLA-DMA BTNL2 LY6G6F VWA7 BAG6 HLA-DOA C2-AS1 MCCD1 PFDN6 C6orf47 SNORD117 HSPA1B SNORD48 HLA-DQB1-AS1 MIR6721 HSD17B8 C4A LOC102725068 HCG26 LY6G6C PHF1 SNORD52 SNORA38 HCG24 PPT2-EGFL8 MIR4646 NELFE FKBPL C2 ATP6V1G2-DDX39B EGFL8 LSM2 PPT2 C6orf25 TAPBP HLA-DRB6 CUTA HLA-DPB1 LST1 TNF HLA-DQB1 MSH5 RPS18 PSMB9 LY6G6D ATF6B DDX39B ZBTB22 LOC100287329 B3GALT4 C6orf48
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss TNXB HSPA1A DDAH2 LY6G5C HCP5 ZBTB12 MICB LY6G6E APOM STK19 SAPCD1-AS1 MICA SAPCD1 LY6G5B ATP6V1G2 LY6G6F MIR6891 VWA7 CYP21A1P LTA BAG6 MIR1236 C2-AS1 MCCD1 LTB NFKBIL1 CFB CSNK2B C6orf47 GPANK1 SNORD117 TNXA HSPA1B SNORD48 SLC44A4 AIF1 PRRC2A MSH5-SAPCD1 C4A LOC102725068 HCG26 DDX39B-AS1 LY6G6C SNORD52 C4B SNORA38 MIR4646 NELFE C2 ATP6V1G2-DDX39B LSM2 CLIC1 C6orf25 LST1 TNF SKIV2L VARS MSH5 HLA-B CYP21A2 LY6G6D HSPA1L DDX39B ABHD16A MIR6832 NCR3 LOC100287329 NEU1 SNORD84 EHMT2 C6orf48 DXO
esv3890823 Chr.6:31903708 - 31910718 on Build GRCh38 Loss C2
nsv508399 Chr.6:31861697 - 31934646 on Build GRCh38 Deletion SLC44A4 ZBTB12 NEU1 C2-AS1 EHMT2 C2

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