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See other NFKBIL1 CNV Assays ›
Gene Symbol
NFKBIL1
Assay Reference Genome
Location

Chr.6:31551499 on build GRCh38
Cytoband
6p21.33
Assay ID Hs03608669_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 4795

Gene Name:

 NFKB inhibitor like 1

Gene Aliases:

 IKBL, LST1, NFKBIL

Location:

 Chr.6:31546851-31558829 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NFKBIL1 NM_001144961.1 NP_001138433.1
NM_001144962.1 NP_001138434.1
NM_001144963.1 NP_001138435.1
NM_005007.3 NP_004998.3
AF097419.1 AAD38108.1
AF097420.1 AAD38109.1
AF097421.1 AAD38110.1
AF097422.1 AAD38111.1
AF097423.1 AAD38112.1
AF097424.1 AAD38113.1
AF097425.1 AAD38114.1
AF097426.1 AAD38115.1
AF097427.1 AAD38116.1
AF097428.1 AAD38117.1
AF097429.1 AAD38118.1
AK291893.1
AK300818.1
AK313888.1
BC105064.1 AAI05065.1
BC105068.1 AAI05069.1
BC143671.1
BM044744.1
DC370256.1
X77909.1 CAA54867.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759414 Chr.6:31060513 - 31574531 on Build GRCh38 Gain+Loss MICA ATP6V1G2-DDX39B MICB PSORS1C1 NFKBIL1 DDX39B-AS1 MCCD1 TCF19 MIR6891 HCP5 ATP6V1G2 DDX39B LTA HCG27 PSORS1C3 SNORD84 PSORS1C2 CDSN HCG26 SNORD117 POU5F1 LOC102725068 CCHCR1 HLA-B C6orf15 HLA-C LOC100287329
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion VWA7 HLA-DRA MIR6721 PPT2-EGFL8 C4B ATP6V1G2-DDX39B LST1 MICB MIR1236 EHMT2 NFKBIL1 C2 TNF PRRC2A C6orf48 HCP5 SNORA38 AGPAT1 MIR6832 LOC100507547 VARS C6orf10 LTA LY6G5B RNF5 SAPCD1 HSPA1L LSM2 PBX2 HSPA1B GPANK1 TNXA SKIV2L ATF6B SNORD52 AGER LY6G5C STK19 LTB BTNL2 NCR3 CYP21A1P ABHD16A C6orf47 FKBPL APOM DDAH2 NEU1 HLA-DRB6 CYP21A2 DDX39B-AS1 MIR6833 HCG23 MCCD1 LY6G6C EGFL8 SNORD48 CSNK2B CFB ATP6V1G2 HSPA1A DDX39B MSH5-SAPCD1 AIF1 MIR4646 SNORD84 GPSM3 NELFE C6orf25 BAG6 SAPCD1-AS1 CLIC1 HLA-DRB1 HCG26 SNORD117 ZBTB12 NOTCH4 LY6G6D HLA-DRB5 PPT2 SLC44A4 LY6G6F LOC102725068 PRRT1 MSH5 C4A C2-AS1 TNXB LY6G6E DXO LOC101929163 LOC100287329
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion MIR3135B C4B ATP6V1G2-DDX39B MICB MIR1236 HLA-DQA2 TNF PRRC2A MIR6832 HCG24 LY6G5B SAPCD1 PSMB8-AS1 PFDN6 HLA-DOB RPS18 PBX2 KIFC1 HSPA1B SKIV2L RING1 HLA-DQB1-AS1 SNORD52 AGER STK19 MIR219A1 LTB C6orf47 DDAH2 SLC39A7 CYP21A2 DDX39B-AS1 HCG23 MCCD1 HLA-DPB2 LY6G6C EGFL8 CUTA HSD17B8 VPS52 MIR6873 MSH5-SAPCD1 AIF1 GPSM3 NELFE C6orf25 BAG6 SAPCD1-AS1 CLIC1 PSMB9 TAP1 SNORD117 COL11A2 HLA-DRB5 SLC44A4 RGL2 ZBTB22 PRRT1 MSH5 C4A HLA-DQB2 VWA7 HLA-DMA RXRB HLA-DRA MIR6721 PPT2-EGFL8 LST1 EHMT2 NFKBIL1 C2 PPP1R2P1 C6orf48 HCP5 SNORA38 AGPAT1 LOC100507547 VARS C6orf10 LTA B3GALT4 SYNGAP1 HLA-DQA1 RNF5 HSPA1L LSM2 GPANK1 TNXA ATF6B WDR46 LY6G5C BTNL2 NCR3 HLA-DPA1 CYP21A1P PSMB8 ABHD16A FKBPL APOM NEU1 HLA-DRB6 HLA-DPB1 TAP2 MIR6833 TAPBP MIR6834 SNORD48 CSNK2B DAXX CFB ATP6V1G2 HSPA1A DDX39B BRD2 HCG25 MIR4646 SNORD84 HLA-DQB1 MIR5004 PHF1 HLA-DRB1 HCG26 ZBTB12 NOTCH4 LY6G6D PPT2 HLA-DMB LOC100294145 LY6G6F LOC102725068 HLA-DOA C2-AS1 TNXB LY6G6E DXO LOC101929163 LOC100287329 ZBTB9
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss VWA7 MICA C4B ATP6V1G2-DDX39B LST1 MICB MIR1236 EHMT2 NFKBIL1 C2 TNF PRRC2A C6orf48 HCP5 SNORA38 MIR6832 VARS LTA LY6G5B SAPCD1 HSPA1L LSM2 HSPA1B GPANK1 HLA-B TNXA SKIV2L SNORD52 LY6G5C STK19 LTB NCR3 CYP21A1P ABHD16A C6orf47 APOM DDAH2 NEU1 CYP21A2 DDX39B-AS1 MCCD1 LY6G6C MIR6891 SNORD48 CSNK2B CFB ATP6V1G2 HSPA1A DDX39B MSH5-SAPCD1 AIF1 MIR4646 SNORD84 NELFE C6orf25 BAG6 SAPCD1-AS1 CLIC1 HCG26 SNORD117 ZBTB12 LY6G6D SLC44A4 LY6G6F LOC102725068 MSH5 C4A C2-AS1 TNXB LY6G6E DXO LOC100287329
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion MIR3135B C4B ATP6V1G2-DDX39B MICB MIR1236 HLA-DQA2 TNF PRRC2A MIR6832 HCG24 LY6G5B SAPCD1 PSMB8-AS1 PFDN6 HLA-DOB RPS18 PBX2 KIFC1 HSPA1B SKIV2L RING1 HLA-DQB1-AS1 SNORD52 AGER STK19 MIR219A1 LTB C6orf47 DDAH2 SLC39A7 CYP21A2 DDX39B-AS1 HCG23 MCCD1 HLA-DPB2 LY6G6C EGFL8 CUTA HSD17B8 VPS52 MIR6873 MSH5-SAPCD1 AIF1 GPSM3 NELFE C6orf25 BAG6 SAPCD1-AS1 CLIC1 PSMB9 TAP1 SNORD117 COL11A2 HLA-DRB5 SLC44A4 RGL2 ZBTB22 PRRT1 MSH5 C4A HLA-DQB2 VWA7 HLA-DMA RXRB HLA-DRA MIR6721 PPT2-EGFL8 LST1 EHMT2 NFKBIL1 C2 PPP1R2P1 C6orf48 HCP5 SNORA38 AGPAT1 LOC100507547 VARS C6orf10 LTA B3GALT4 SYNGAP1 HLA-DQA1 RNF5 HSPA1L LSM2 GPANK1 TNXA ATF6B WDR46 LY6G5C BTNL2 NCR3 HLA-DPA1 CYP21A1P PSMB8 ABHD16A FKBPL APOM NEU1 HLA-DRB6 HLA-DPB1 TAP2 MIR6833 TAPBP MIR6834 SNORD48 CSNK2B DAXX CFB ATP6V1G2 HSPA1A DDX39B BRD2 HCG25 MIR4646 SNORD84 HLA-DQB1 MIR5004 PHF1 HLA-DRB1 HCG26 ZBTB12 NOTCH4 LY6G6D PPT2 HLA-DMB LOC100294145 LY6G6F LOC102725068 HLA-DOA C2-AS1 TNXB LY6G6E DXO LOC101929163 LOC100287329 ZBTB9
nsv470809 Chr.6:31529138 - 31576412 on Build GRCh38 Loss DDX39B-AS1 MCCD1 TNF SNORD84 ATP6V1G2 SNORD117 DDX39B ATP6V1G2-DDX39B LOC100287329 LTA NFKBIL1
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss VWA7 HLA-DRA MICA MIR6721 PPT2-EGFL8 C4B ATP6V1G2-DDX39B LST1 MICB MIR1236 EHMT2 NFKBIL1 C2 TNF PRRC2A C6orf48 HCP5 SNORA38 AGPAT1 MIR6832 LOC100507547 VARS C6orf10 LTA LY6G5B RNF5 SAPCD1 HSPA1L LSM2 PBX2 HSPA1B GPANK1 HLA-B TNXA SKIV2L ATF6B SNORD52 AGER LY6G5C STK19 LTB BTNL2 NCR3 CYP21A1P ABHD16A C6orf47 FKBPL APOM DDAH2 NEU1 CYP21A2 DDX39B-AS1 MIR6833 HCG23 MCCD1 LY6G6C MIR6891 EGFL8 SNORD48 CSNK2B CFB ATP6V1G2 HSPA1A DDX39B MSH5-SAPCD1 AIF1 MIR4646 SNORD84 GPSM3 NELFE C6orf25 BAG6 SAPCD1-AS1 CLIC1 HCG26 SNORD117 ZBTB12 NOTCH4 LY6G6D PPT2 SLC44A4 LY6G6F LOC102725068 PRRT1 MSH5 C4A C2-AS1 TNXB LY6G6E DXO LOC101929163 LOC100287329
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss LY6G5C LTB NCR3 ABHD16A C6orf47 APOM ATP6V1G2-DDX39B LST1 NFKBIL1 DDX39B-AS1 MCCD1 TNF PRRC2A CSNK2B SNORA38 MIR6832 ATP6V1G2 DDX39B LTA LY6G5B AIF1 SNORD84 BAG6 SNORD117 GPANK1 LOC100287329

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