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Gene Symbol
EEF1D
Assay Reference Genome
Location

Chr.8:143581800 on build GRCh38
Cytoband
8q24.3
Assay ID Hs03684611_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1936

Gene Name:

 eukaryotic translation elongation factor 1 delta

Gene Aliases:

 EF-1D, EF1D, FP1047

Location:

 Chr.8:143579697-143597675 on Build GRCh38

Assay Gene Location:

 Within Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
EEF1D NM_001130053.2 NP_001123525.2
NM_001130055.2 NP_001123527.1
NM_001130056.2 NP_001123528.1
NM_001130057.2 NP_001123529.1
NM_001195203.1 NP_001182132.1
NM_001289950.1 NP_001276879.1
NM_001317743.1 NP_001304672.1
NM_001960.4 NP_001951.2
NM_032378.4 NP_115754.3
XM_005250820.3 XP_005250877.1
XM_005250823.1 XP_005250880.1
XM_006716519.3 XP_006716582.1
XM_006716520.3 XP_006716583.1
XM_006716522.1 XP_006716585.1
XM_006716523.1 XP_006716586.1
XM_006716524.1 XP_006716587.1
XM_006716525.1 XP_006716588.1
XM_011516905.2 XP_011515207.1
XM_011516906.2 XP_011515208.1
XM_017013168.1 XP_016868657.1
XM_017013169.1 XP_016868658.1
XM_017013170.1 XP_016868659.1
XM_017013171.1 XP_016868660.1
XM_017013172.1 XP_016868661.1
XM_017013173.1 XP_016868662.1
AF370363.1 AAQ15199.1
AK024550.1 BAB14925.1
AK093756.1
AK225040.1
AK225243.1
AK225270.1
AK293339.1
AK314311.1
AL833379.1 1 2452
BC000678.2 AAH00678.2
BC007847.2 AAH07847.1
BC062535.1 AAH62535.1
BC094806.1 AAH94806.1
BG482145.1
BG748894.1
BI667117.1
BQ686171.1
BT007242.1 AAP35906.1
CN424083.1
CN424105.1
CX787126.1
Z21507.1 CAA79716.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv470247 Chr.8:143283403 - 143615483 on Build GRCh38 Loss TSTA3 TIGD5 ZNF696 GSDMD MAFA PYCRL MAFA-AS1 RHPN1 MROH6 EEF1D ZC3H3 NAPRT RHPN1-AS1 TOP1MT
dgv12418n54 Chr.8:143574584 - 143611897 on Build GRCh38 Loss PYCRL EEF1D NAPRT TIGD5
nsv1161810 Chr.8:143542268 - 143622987 on Build GRCh38 Deletion PYCRL TSTA3 MROH6 EEF1D ZC3H3 NAPRT TIGD5 GSDMD
nsv612793 Chr.8:143552167 - 143630578 on Build GRCh38 Loss PYCRL TSTA3 MROH6 EEF1D NAPRT TIGD5 GSDMD
dgv12410n54 Chr.8:143533025 - 143611897 on Build GRCh38 Loss PYCRL MROH6 EEF1D ZC3H3 NAPRT TIGD5 GSDMD
nsv612774 Chr.8:143489261 - 143606976 on Build GRCh38 Loss PYCRL MROH6 EEF1D ZC3H3 NAPRT TIGD5 GSDMD
nsv470248 Chr.8:143549816 - 143582424 on Build GRCh38 Gain MROH6 EEF1D NAPRT GSDMD
nsv1161809 Chr.8:143467990 - 143610108 on Build GRCh38 Deletion PYCRL MROH6 EEF1D ZC3H3 NAPRT TIGD5 GSDMD
nsv950013 Chr.8:143465031 - 143616230 on Build GRCh38 Deletion PYCRL TSTA3 MROH6 EEF1D ZC3H3 NAPRT TIGD5 GSDMD
nsv612777 Chr.8:143538914 - 143632493 on Build GRCh38 Gain PYCRL TSTA3 MROH6 EEF1D ZC3H3 NAPRT TIGD5 GSDMD
nsv612812 Chr.8:143563290 - 143592878 on Build GRCh38 Loss MROH6 EEF1D NAPRT
dgv7336n100 Chr.8:143510004 - 143616975 on Build GRCh38 Gain PYCRL TSTA3 MROH6 EEF1D ZC3H3 NAPRT TIGD5 GSDMD
nsv612813 Chr.8:143566472 - 143611669 on Build GRCh38 Loss PYCRL MROH6 EEF1D NAPRT TIGD5
nsv466000 Chr.8:143551386 - 143582424 on Build GRCh38 Loss MROH6 EEF1D NAPRT GSDMD
nsv466004 Chr.8:143581491 - 143640022 on Build GRCh38 Loss PYCRL TSTA3 EEF1D TIGD5 ZNF623

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More Information


Additional Information:

For this assay, SNP(s) [rs73379012] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

translation elongation factor

Gene Ontology Categories:

Function(s) Process(es)


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