Hs03743353_cn

• Gene Symbol: LDB3
• Assay Reference Genome Location: Chr.10:86674466 on build GRCh38
• Cytoband: 10q23.2

Target Gene Details

• Entrez Gene ID: 11155
• Gene Name: LIM domain binding 3
• Gene Aliases: CMD1C, CMH24, CMPD3, CYPHER, LDB3Z1, LDB3Z4, LVNC3, MFM4, ORACLE, PDLIM6, ZASP
• Location: Chr.10:86664785-86736072 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LDB3	NM_001080114.1			NP_001073583.1
	NM_001080115.1			NP_001073584.1
	NM_001080116.1			NP_001073585.1
	NM_001171610.1			NP_001165081.1
	NM_001171611.1			NP_001165082.1
	NM_007078.2			NP_009009.1
	XM_005269464.4			XP_005269521.1
	XM_005269466.4			XP_005269523.1
	XM_005269468.4			XP_005269525.1
	XM_011539184.2			XP_011537486.1
	XM_011539185.2			XP_011537487.1
	XM_011539186.2			XP_011537488.1
	XM_011539187.2			XP_011537489.1
	XM_011539188.2			XP_011537490.1
	XM_011539189.1			XP_011537491.1
	XM_011539190.1			XP_011537492.1
	XM_011539191.2			XP_011537493.1
	XM_011539193.1			XP_011537495.1
	XM_011539194.1			XP_011537496.1
	XM_011539195.2			XP_011537497.1
	XM_017015606.1			XP_016871095.1
	XM_017015608.1			XP_016871097.1
	XM_017015609.1			XP_016871098.1
	AB014513.1
	AF276807.1			AAQ14316.1
	AF276808.1			AAQ14317.1
	AF276809.1			AAQ14318.1
	AJ133766.1			CAB46727.1
	AJ133767.1			CAB46728.1
	AJ133768.1			CAB46729.1
	AK294696.1
	AK297871.1
	AK300692.1
	AK304760.1
	AL601484.1
	BC010929.2			AAH10929.1
	DA898241.1
	DC357269.1
	KF772970.1
	KU178543.1
	KU178544.1
	KU178545.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1049754	Chr.10:86604960 - 86699322 on Build GRCh38	Gain	OPN4 LDB3
nsv517139	Chr.10:86672571 - 86682683 on Build GRCh38	Gain+Loss	LDB3
nsv524269	Chr.10:86654455 - 86680809 on Build GRCh38	Loss	OPN4 LDB3
dgv116n27	Chr.10:86653555 - 86682683 on Build GRCh38	Loss	OPN4 LDB3
dgv948n100	Chr.10:86646619 - 86714855 on Build GRCh38	Gain	OPN4 LDB3
nsv551783	Chr.10:86630480 - 86680809 on Build GRCh38	Loss	OPN4 LDB3
nsv470968	Chr.10:86647213 - 86709830 on Build GRCh38	Loss	OPN4 LDB3

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

actin or actin-binding cytoskeletal protein

Gene Ontology Categories:

Process(es)

sarcomere organization

Function(s)

protein kinase C binding
protein binding
cytoskeletal protein binding
zinc ion binding
muscle alpha-actinin binding