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See other AP2A2 CNV Assays ›
Gene Symbol
AP2A2
Assay Reference Genome
Location

Chr.11:928033 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03786221_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 161

Gene Name:

 adaptor related protein complex 2 alpha 2 subunit

Gene Aliases:

 ADTAB, CLAPA2, HIP-9, HIP9, HYPJ

Location:

 Chr.11:925809-1012245 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AP2A2 NM_001242837.1 NP_001229766.1
NM_012305.3 NP_036437.1
XM_011519930.2 XP_011518232.1
AB020706.2 BAA74922.2
AK001986.1
AK027891.1 BAB55435.1
AK223558.1 BAD97278.1
AK293763.1
AK299364.1
BC006155.1 AAH06155.1
BG705558.1
BI462785.1
DB461570.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3625088 Chr.11:876861 - 979340 on Build GRCh38 Gain AP2A2 CHID1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss LOC101059906 TMEM80 ANO9 TOLLIP POLR2L EPS8L2 MUC2 CRACR2B TALDO1 SCT MUC6 AP2A2 CDHR5 CHID1 PKP3 SLC25A22 PTDSS2 HRAS LOC171391 PIDD1 CEND1 RPLP2 PNPLA2 MUC5AC LOC143666 CD151 TSPAN4 MIR210HG DEAF1 MIR210 RNH1 PANO1 B4GALNT4 MIR6744 IRF7 MUC5B SNORA52 LRRC56 PHRF1 RASSF7 LOC101927503 DRD4 PDDC1 SIGIRR LMNTD2
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain MUC6 AP2A2 CHID1 TSPAN4
nsv428244 Chr.11:882364 - 1061595 on Build GRCh38 Loss MUC6 AP2A2 CHID1 LOC101927503
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain RPLP2 PNPLA2 POLR2L CD151 TSPAN4 CRACR2B PANO1 AP2A2 SNORA52 CHID1 SLC25A22 PDDC1 LOC171391 PIDD1 CEND1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss LOC101059906 TMEM80 ANO9 TOLLIP POLR2L EPS8L2 MUC2 CRACR2B TALDO1 SCT MUC6 AP2A2 CDHR5 CHID1 SLC25A22 PTDSS2 HRAS LOC171391 PIDD1 CEND1 RPLP2 TOLLIP-AS1 PNPLA2 MUC5AC LOC143666 CD151 TSPAN4 MIR210HG DEAF1 MIR210 RNH1 PANO1 MIR6744 IRF7 MUC5B SNORA52 LRRC56 PHRF1 RASSF7 LOC101927503 DRD4 PDDC1 SIGIRR LMNTD2
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion TOLLIP-AS1 MUC5AC TOLLIP TSPAN4 MUC2 MIR6744 MUC6 AP2A2 MOB2 MUC5B CHID1 LOC101927503 BRSK2
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss RPLP2 AP2A2 PNPLA2 SNORA52 POLR2L CD151 CHID1 TSPAN4 CRACR2B PIDD1
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion LOC101059906 TMEM80 ANO9 POLR2L EPS8L2 CRACR2B TALDO1 SCT AP2A2 CDHR5 CHID1 PKP3 SLC25A22 PTDSS2 HRAS LOC171391 PIDD1 CEND1 RPLP2 PNPLA2 LOC143666 CD151 TSPAN4 MIR210HG DEAF1 MIR210 RNH1 PANO1 B4GALNT4 IRF7 SNORA52 LRRC56 PHRF1 RASSF7 DRD4 PDDC1 SIGIRR LMNTD2
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion TOLLIP-AS1 MUC5AC TOLLIP TSPAN4 MUC2 MIR6744 MUC6 AP2A2 MOB2 MUC5B CHID1 LOC101927503 BRSK2

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More Information


Additional Information:

For this assay, SNP(s) [rs117204479] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Function(s) Process(es)


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