Hs03900712_cn

• Gene Symbol: PATL2
• Assay Reference Genome Location: Chr.15:44681942 on build GRCh38
• Cytoband: 15q21.1

Target Gene Details

• Entrez Gene ID: 197135
• Gene Name: PAT1 homolog 2
• Gene Aliases: Pat1a, hPat1a
• Location: Chr.15:44665732-44711389 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PATL2	XM_011521338.2			XP_011519640.1
	XM_011521339.2			XP_011519641.1
	XM_011521340.2			XP_011519642.1
	XM_011521343.2			XP_011519645.1
	XM_011521345.2			XP_011519647.1
	AK130783.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1517	Chr.15:44662336 - 44697647 on Build GRCh38	Insertion	PATL2 SPG11
esv2760029	Chr.15:44676670 - 45130644 on Build GRCh38	Gain+Loss	DUOX1 PATL2 LOC100419583 DUOX2 DUOXA2 TERB2 DUOXA1 B2M TRIM69 SORD

More Information

Additional Information:

For this assay, SNP(s) [rs80036040] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Process(es)

deadenylation-dependent decapping of nuclear-transcribed mRNA
negative regulation of cytoplasmic mRNA processing body assembly
negative regulation of translation
cytoplasmic mRNA processing body assembly

Function(s)

RNA binding
protein binding