Hs03923300_cn

• Gene Symbol: CHST6
• Assay Reference Genome Location: Chr.16:75480538 on build GRCh38
• Cytoband: 16q23.1

Target Gene Details

• Entrez Gene ID: 4166
• Gene Name: carbohydrate sulfotransferase 6
• Gene Aliases: MCDC1
• Location: Chr.16:75473124-75495419 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CHST6	NM_021615.4			NP_067628.1
	XM_005255955.4			XP_005256012.1
	XM_011523085.2			XP_011521387.1
	AF280086.1			AAG48244.1
	BC074834.2			AAH74834.1
	BC074883.2			AAH74883.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1063718	Chr.16:75362071 - 75574173 on Build GRCh38	Gain	CHST5 CHST6 TMEM231 GABARAPL2 TMEM170A CFDP1
esv3639093	Chr.16:75476237 - 75490082 on Build GRCh38	Loss	CHST6
esv3571642	Chr.16:75471148 - 75515756 on Build GRCh38	Gain	CHST6
esv2758657	Chr.16:75385716 - 75543073 on Build GRCh38	Gain	CHST5 CHST6 TMEM231 TMEM170A CFDP1
nsv525955	Chr.16:75439434 - 75594447 on Build GRCh38	Loss	CHST5 CHST6 TMEM231 GABARAPL2 TMEM170A
nsv1065995	Chr.16:75339858 - 75592129 on Build GRCh38	Loss	CHST5 CHST6 TMEM231 GABARAPL2 TMEM170A CFDP1
nsv457521	Chr.16:75453860 - 75570027 on Build GRCh38	Gain	CHST5 CHST6 TMEM231 GABARAPL2 TMEM170A

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

transferase

Gene Ontology Categories:

Process(es)

carbohydrate metabolic process
N-acetylglucosamine metabolic process
sulfur compound metabolic process
keratan sulfate biosynthetic process

Function(s)

N-acetylglucosamine 6-O-sulfotransferase activity