Name: [Hs03930607_cn] [ATP2C2]
Creator: Thermo Fisher Scientific
Keywords: [ATP2C2] Assay, [ATPase secretory pathway Ca2+ transporting 2] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	9914
Gene Name:	ATPase secretory pathway Ca2+ transporting 2
Gene Aliases:	SPCA2
Location:	Chr.16:84368523-84465777 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Protein ID
ATP2C2	NM_001286527.2	NP_001273456.2
	NM_014861.3	NP_055676.3
	AK300526.1
	AK316128.1
	AY791884.1	AAV54193.1
	BX648333.1	CAI46049.1
	CR749829.1	CAH18686.1
	DB218862.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1064677	Chr.16:84384525 - 84462657 on Build GRCh38	Loss	ATP2C2 LOC105371374
nsv1059640	Chr.16:84338790 - 84543759 on Build GRCh38	Loss	ATP2C2 LOC105371374 TLDC1
dgv548e214	Chr.16:84253360 - 84417275 on Build GRCh38	Gain	WFDC1 LOC105376777 ATP2C2
dgv5262n54	Chr.16:84381903 - 84583279 on Build GRCh38	Loss	COTL1 ATP2C2 LOC105371374 TLDC1
dgv169n21	Chr.16:84346305 - 84480735 on Build GRCh38	Loss	ATP2C2 LOC105371374 TLDC1
esv3892928	Chr.16:84339110 - 84524557 on Build GRCh38	Loss	ATP2C2 LOC105371374 TLDC1
nsv573425	Chr.16:84298994 - 84575953 on Build GRCh38	Loss	WFDC1 COTL1 ATP2C2 LOC105371374 TLDC1
nsv471107	Chr.16:84378250 - 84455427 on Build GRCh38	Gain	ATP2C2
nsv457598	Chr.16:84367244 - 84435705 on Build GRCh38	Loss	ATP2C2
nsv457599	Chr.16:84378422 - 84455324 on Build GRCh38	Gain	ATP2C2
nsv483044	Chr.16:84166395 - 87066394 on Build GRCh38	Gain	KCNG4 WFDC1 KIAA0513 LOC101928557 EMC8 LOC101928474 IRF8 MIR6774 DNAAF1 FOXL1 FLJ30679 ATP2C2 LOC105371374 ZDHHC7 ADAD2 C16orf74 LOC105376777 MIR5093 USP10 KLHL36 GINS2 COTL1 LINC01082 LOC146513 LINC00917 CRISPLD2 TLDC1 COX4I1 FAM92B LINC00311 FOXC2-AS1 LINC01081 LOC440390 TAF1C FOXC2 FOXF1 FENDRR LOC102724344 LOC101928614 LOC400548 MTHFSD GSE1 MIR1910