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See other SLC9A3R2 CNV Assays ›
Gene Symbol
SLC9A3R2
Assay Reference Genome
Location

Chr.16:2033538 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03937180_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9351

Gene Name:

 SLC9A3 regulator 2

Gene Aliases:

 E3KARP, NHE3RF2, NHERF-2, NHERF2, OCTS2, SIP-1, SIP1, TKA-1

Location:

 Chr.16:2026868-2039026 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC9A3R2 NM_001130012.2 NP_001123484.1
NM_001252073.1 NP_001239002.1
NM_001252075.1 NP_001239004.1
NM_001252076.1 NP_001239005.1
NM_004785.5 NP_004776.3
XM_005255702.4 XP_005255759.1
XM_017023894.1 XP_016879383.1
XM_017023895.1 XP_016879384.1
AF004900.1 AAC63061.1
AF035771.1 AAC52090.1
BC014513.1 AAH14513.2
BC069014.1 AAH69014.1
BC106001.1 AAI06002.1
BQ687174.1
BX377861.2
CB961565.1
DB495688.2
U82108.1 AAB53042.1
Z50150.1 CAA90511.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication HAGH MRPL28 LMF1-AS1 DECR2 SNORD60 RAB11FIP3 RPS2 TBL3 NARFL LINC00254 MIR6767 RPUSD1 LOC101929280 MSLN MIR6511B1 LOC652276 E4F1 PRR25 LOC100134368 DNASE1L2 GFER FAHD1 NDUFB10 HBM MIR3177 C1QTNF8 SYNGR3 ZNF598 LOC105371047 MIR4717 TRAF7 CAPN15 LOC105371046 MRPS34 LOC106660606 CASKIN1 TELO2 RHBDF1 TSC2 CEMP1 CHTF18 RAB40C TMEM8A NOXO1 SSTR5 ABCA17P SNHG9 HBZ MIR940 SNORA10 MIR4516 NPW LOC105371049 LOC729652 MIR6768 TPSG1 C16orf59 SNORA64 ECI1 ATP6V0C MIR6859-4 LUC7L CCNF LOC105371045 NTN3 LOC107984876 NME3 NME4 MIR5587 MIR3176 DDX11L10 EME2 WDR24 PIGQ METTL26 FAM173A RHBDL1 LOC107987233 MCRIP2 FLJ42627 PDPK1 HBA1 MIR3677 POLR3K HAGHL RNPS1 MIR662 TPSD1 RGS11 HS3ST6 PGP STUB1 AMDHD2 KCTD5 TMEM204 WASIR2 RAB26 NPRL3 FAM234A UBE2I BAIAP3 RNF151 CLCN7 LMF1 MIR3180-5 PRSS27 WDR90 LOC100287175 RHOT2 CRAMP1 ABCA3 LOC105371184 WFIKKN1 HBQ1 FBXL16 SNRNP25 MSRB1 HN1L NUBP2 AXIN1 PTX4 ARHGDIG METRN RPL23AP5 PRR35 CCDC154 SSTR5-AS1 JMJD8 MIR3178 CACNA1H NHLRC4 IGFALS TPSB2 BRICD5 SNHG19 MAPK8IP3 TBC1D24 PDIA2 GNG13 RPL3L SOX8 TPSAB1 IFT140 LOC105371038 MLST8 ERVK13-1 PRSS29P HBA2 UNKL NTHL1 CCDC78 MIR1225 TSR3 MPG PKD1 SPSB3 SNORA78 MEIOB SLC9A3R2 GNPTG LINC00235 C16orf91
nsv521569 Chr.16:1971892 - 2035996 on Build GRCh38 Loss NPW NOXO1 SYNGR3 TBL3 ZNF598 SLC9A3R2 GFER
dgv4858n54 Chr.16:1955562 - 2038584 on Build GRCh38 Loss NDUFB10 RNF151 NOXO1 SYNGR3 RPS2 TBL3 ZNF598 SNHG9 SNORA10 NPW SNORA64 SNORA78 SLC9A3R2 GFER
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion NDUFB10 RNF151 NOXO1 SYNGR3 RPS2 TBL3 ZNF598 SNHG9 SNORA10 MIR4516 NPW HS3ST6 NTHL1 LOC105371049 MIR6511B1 MIR1225 MSRB1 SNORA64 PKD1 TSC2 SNORA78 RPL3L SLC9A3R2 GFER
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion NDUFB10 RNF151 NOXO1 SYNGR3 RPS2 TBL3 ZNF598 SNHG9 SNORA10 NPW NTHL1 LOC105371049 MIR6511B1 MIR1225 SNORA64 PKD1 TSC2 SNORA78 SLC9A3R2 GFER
dgv336n27 Chr.16:1965120 - 2038584 on Build GRCh38 Loss NPW RNF151 NOXO1 SYNGR3 TBL3 ZNF598 SNHG9 SNORA78 SLC9A3R2 GFER
nsv571189 Chr.16:2004154 - 2037561 on Build GRCh38 Loss NPW ZNF598 SLC9A3R2

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