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See other CRAMP1 CNV Assays ›
Gene Symbol
CRAMP1
Assay Reference Genome
Location

Chr.16:1620135 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03952710_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57585

Gene Name:

 cramped chromatin regulator homolog 1

Gene Aliases:

 CRAMP1L, HN1L, TCE4

Location:

 Chr.16:1614640-1677908 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CRAMP1 NM_020825.3 NP_065876.3
BE048705.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss LOC105371046 MAPK8IP3 NME3 HAGH NUBP2 MRPS34 MIR3177 HN1L SPSB3 CRAMP1 IFT140 EME2 IGFALS
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LOC105371049 MIR6859-4 PIGQ ABCA3 HAGHL ATP6V0C METTL26 MAPK8IP3 CASKIN1 TPSG1 MRPS34 BAIAP3 TPSD1 HBA1 MIR3176 LINC00235 IFT140 HBQ1 MIR4516 C16orf59 E4F1 CEMP1 RNF151 MSLN PGP AMDHD2 WDR90 RPL23AP5 C1QTNF8 MPG ECI1 TSR3 SNORA10 RHOT2 FAM234A NPRL3 WFIKKN1 UBE2I PDPK1 SNORA78 CRAMP1 METRN RHBDL1 PRSS27 TPSB2 ARHGDIG MEIOB LOC105371184 TMEM8A LOC652276 FLJ42627 SNORA64 FAHD1 TMEM204 RAB40C ABCA17P MIR940 POLR3K DNASE1L2 HBA2 RAB26 SSTR5-AS1 NHLRC4 PTX4 PRSS29P MIR6767 ZNF598 MIR3677 NUBP2 NOXO1 HN1L LINC00254 DECR2 RAB11FIP3 MIR6768 EME2 RHBDF1 DDX11L10 MCRIP2 MIR6511B1 RNPS1 LOC105371046 RPUSD1 TRAF7 KCTD5 PRR25 CAPN15 MSRB1 C16orf91 MIR5587 PKD1 NTN3 MRPL28 NDUFB10 CCDC78 SPSB3 SNORD60 FBXL16 JMJD8 GNG13 LOC105371038 ERVK13-1 LOC100134368 TELO2 LOC105371045 CCNF NME4 WASIR2 MIR4717 HAGH BRICD5 CACNA1H HS3ST6 CLCN7 MIR3178 MIR3177 AXIN1 GFER UNKL PDIA2 TBC1D24 NPW LUC7L LOC107984876 SLC9A3R2 TSC2 SYNGR3 HBZ NARFL SOX8 STUB1 RPS2 LOC105371047 HBM GNPTG PRR35 NME3 LOC106660606 SNRNP25 FAM173A SSTR5 LMF1-AS1 TPSAB1 RPL3L NTHL1 WDR24 LOC100287175 MIR1225 SNHG19 RGS11 MIR3180-5 CHTF18 MLST8 TBL3 LMF1 MIR662 CCDC154 LOC729652 LOC107987233 IGFALS SNHG9 LOC101929280
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss LOC105371046 LOC105371047 MEIOB MAPK8IP3 NME3 HAGH NUBP2 MRPS34 MIR3177 HN1L SPSB3 FAHD1 TMEM204 CRAMP1 IFT140 EME2 IGFALS TELO2
dgv4855n54 Chr.16:1577507 - 1694025 on Build GRCh38 Loss HN1L LOC105371046 CRAMP1 IFT140
nsv428317 Chr.16:1550716 - 1711581 on Build GRCh38 Gain HN1L LOC105371046 TMEM204 CRAMP1 IFT140 MAPK8IP3
nsv827496 Chr.16:1589777 - 1638333 on Build GRCh38 Gain LOC105371046 CRAMP1 IFT140

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)


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