Hs03966120_cn

• Gene Symbol: SLFN5
• Assay Reference Genome Location: Chr.17:35263070 on build GRCh38
• Cytoband: 17q12

Target Gene Details

• Entrez Gene ID: 162394
• Gene Name: schlafen family member 5
• Gene Aliases: -
• Location: Chr.17:35243026-35273650 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLFN5	NM_144975.3			NP_659412.3
	XM_005257934.3			XP_005257991.1
	AK054668.1			BAB70788.1
	AK303299.1
	AK303632.1
	BC125200.1
	BC125201.1
	BX647942.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422399	Chr.17:35212221 - 35291582 on Build GRCh38	Deletion	SLFN5 LOC105371932
esv3892998	Chr.17:35106468 - 35295755 on Build GRCh38	Loss	FNDC8 RAD51D RAD51L3-RFFL SLC35G3 SLFN5 NLE1 LOC105371932 UNC45B
esv3892999	Chr.17:35252863 - 35925533 on Build GRCh38	Loss	RDM1 RASL10B MMP28 C17orf50 SLFN12L SNORD7 SLFN5 SLFN13 LOC105371933 LOC105371743 GAS2L2 HEATR9 SLFN11 CCL5 AP2B1 SLFN12 LRRC37A8P PEX12 TAF15 SLFN14
nsv574741	Chr.17:35225256 - 35500115 on Build GRCh38	Loss	SLFN11 SLFN12 SLFN12L SLFN5 SLFN13 LOC105371933 LOC105371932

More Information

Additional Information:

For this assay, SNP(s) [rs115340692] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

cell differentiation

Function(s)

ATP binding