Hs03971232_cn

• Gene Symbol: OTOP2
• Assay Reference Genome Location: Chr.17:74924179 on build GRCh38
• Cytoband: 17q25.1

Target Gene Details

• Entrez Gene ID: 92736
• Gene Name: otopetrin 2
• Gene Aliases: -
• Location: Chr.17:74922963-74933913 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
OTOP2	XM_011525479.1	2	115	XP_011523781.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833540	Chr.17:74838971 - 75019365 on Build GRCh38	Loss	FADS6 HID1-AS1 CDR2L MRPL58 GRIN2C HID1 TMEM104 USH1G OTOP2 FDXR OTOP3
nsv518292	Chr.17:74810882 - 74982818 on Build GRCh38	Loss	FADS6 HID1-AS1 GRIN2C HID1 TMEM104 USH1G OTOP2 FDXR OTOP3
nsv952367	Chr.17:74751962 - 74961105 on Build GRCh38	Deletion	FADS6 GRIN2C NAT9 HID1 TMEM104 SLC9A3R1 USH1G OTOP2 FDXR OTOP3
nsv576026	Chr.17:74889500 - 74982818 on Build GRCh38	Gain	FADS6 HID1-AS1 HID1 USH1G OTOP2 OTOP3
nsv1056788	Chr.17:74922211 - 75028689 on Build GRCh38	Gain	HID1-AS1 CDR2L MRPL58 HID1 USH1G OTOP2 OTOP3

More Information

Additional Information:

For this assay, SNP(s) [rs73997567] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

transporter