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See other FSCN2 CNV Assays ›
Gene Symbol
FSCN2
Assay Reference Genome
Location

Chr.17:81518600 on build GRCh38
Cytoband
17q25.3
Assay ID Hs03972264_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 25794

Gene Name:

 fascin actin-bundling protein 2, retinal

Gene Aliases:

 RFSN, RP30

Location:

 Chr.17:81513019-81537130 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FSCN2 XM_011524590.2 XP_011522892.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv26223 Chr.17:80659041 - 81736487 on Build GRCh38 Gain+Loss MIR6786 MIR3065 MIR1250 LOC105371921 LOC105371925 MIR4740 AATK ARL16 OXLD1 PDE6G NPLOC4 LOC400627 CCDC137 CEP131 TSPAN10 SLC25A10 FSCN2 MIR338 FAAP100 TMEM105 RPTOR LOC107985022 LOC100129503 MIR657 C17orf89 BAIAP2-AS1 LOC101928855 AATK-AS1 LOC107985021 CHMP6 HGS LOC100130370 BAHCC1 BAIAP2 MIR3186 LINC00482 MRPL12 TEPSIN ACTG1 SLC38A10
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain TEX19 MIR6787 MIR6786 DCXR LOC105371925 ASPSCR1 AATK ARL16 OXLD1 SNORD134 NPLOC4 CCDC137 CEP131 LOC101929511 CCDC57 UTS2R CSNK1D FSCN2 FAAP100 LOC105371944 TMEM105 DUS1L RFNG MAFG-AS1 ARHGDIA ANAPC11 C17orf89 GCGR AATK-AS1 FOXK2 FASN LOC105376790 RAC3 WDR45B HEXDC MAFG MIR3186 PYCR1 SIRT7 MIR4525 FN3K STRA13 SLC38A10 ZNF750 SLC16A3 LOC105376791 MCRIP1 MIR4740 GPS1 PDE6G ALYREF TSPAN10 SLC25A10 PPP1R27 SECTM1 MYADML2 PCYT2 RAB40B P4HB NPB LRRC45 CD7 TBCD OGFOD3 NOTUM HGS LOC100130370 BAHCC1 B3GNTL1 C17orf62 LINC00482 MRPL12 NARF TEPSIN LOC101929552 ACTG1 FN3KRP
nsv470620 Chr.17:81516973 - 82064485 on Build GRCh38 Loss MIR6786 MCRIP1 DCXR ASPSCR1 GPS1 ARL16 OXLD1 PDE6G NPLOC4 CCDC137 ALYREF TSPAN10 SLC25A10 PPP1R27 MYADML2 PCYT2 FSCN2 P4HB FAAP100 DUS1L NPB RFNG MAFG-AS1 LRRC45 ARHGDIA ANAPC11 GCGR NOTUM RAC3 HGS MAFG PYCR1 SIRT7 MRPL12 STRA13
nsv457973 Chr.17:81406747 - 81526679 on Build GRCh38 Loss MIR3186 FSCN2 ACTG1 BAHCC1
nsv833568 Chr.17:81491932 - 81635795 on Build GRCh38 Loss FSCN2 ACTG1 FAAP100 NPLOC4
nsv952389 Chr.17:81137501 - 81593774 on Build GRCh38 Deletion C17orf89 LOC105371925 MIR4740 AATK-AS1 AATK NPLOC4 LOC100130370 BAHCC1 CEP131 MIR3186 LINC00482 TEPSIN FSCN2 ACTG1 FAAP100 TMEM105 SLC38A10
nsv978468 Chr.17:81509722 - 81520115 on Build GRCh38 Duplication FSCN2 ACTG1

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More Information


Additional Information:

For this assay, SNP(s) [rs74006315] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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