Hs03976142_cn

• Gene Symbol: OGFOD3
• Assay Reference Genome Location: Chr.17:82400893 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 79701
• Gene Name: 2-oxoglutarate and iron dependent oxygenase domain containing 3
• Gene Aliases: C17orf101
• Location: Chr.17:82389210-82418637 on Build GRCh38
• Assay Gene Location: Within Intron 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
OGFOD3	NM_024648.2			NP_078924.1
	NM_175902.4			NP_787098.3
	NR_033265.1
	AK025875.1			BAB15267.1
	AK311057.1
	BC008897.1			AAH08897.1
	BC023602.2			AAH23602.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1059334	Chr.17:82277007 - 82411683 on Build GRCh38	Gain	LOC101929511 SECTM1 OGFOD3 TEX19 LOC105376790 UTS2R CD7
nsv833573	Chr.17:82275053 - 82406183 on Build GRCh38	Loss	LOC101929511 SECTM1 OGFOD3 TEX19 LOC105376790 UTS2R CD7
esv2760445	Chr.17:82267669 - 82421456 on Build GRCh38	Gain	LOC101929511 SECTM1 OGFOD3 TEX19 CSNK1D HEXDC LOC105376790 UTS2R CD7
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	B3GNTL1 GCGR RAB40B RAC3 LOC105371925 SLC16A3 SIRT7 MIR6787 LOC105376791 CCDC137 TEPSIN LOC101929552 LOC101929511 TBCD ASPSCR1 FN3KRP HEXDC SLC38A10 ANAPC11 ARL16 MCRIP1 AATK SECTM1 PCYT2 PPP1R27 HGS ALYREF ARHGDIA AATK-AS1 LOC105376790 MIR4525 DUS1L MRPL12 NARF MIR4740 P4HB FOXK2 WDR45B PYCR1 LOC105371944 MIR3186 OGFOD3 DCXR LOC100130370 FASN LINC00482 UTS2R SNORD134 CCDC57 MYADML2 MAFG SLC25A10 STRA13 OXLD1 CSNK1D ZNF750 TSPAN10 FAAP100 C17orf89 LRRC45 NOTUM TEX19 RFNG TMEM105 FN3K NPB PDE6G MAFG-AS1 CD7 NPLOC4 MIR6786 ACTG1 FSCN2 CEP131 GPS1 C17orf62 BAHCC1
nsv1067160	Chr.17:82381853 - 82446450 on Build GRCh38	Loss	OGFOD3 HEXDC LOC105376790 C17orf62
nsv828143	Chr.17:82400094 - 82429642 on Build GRCh38	Loss	OGFOD3 HEXDC
nsv469561	Chr.17:82251148 - 82472274 on Build GRCh38	Loss	LOC101929511 NARF SECTM1 OGFOD3 TEX19 CSNK1D HEXDC LOC105376790 C17orf62 UTS2R CD7
nsv952394	Chr.17:82297625 - 82408424 on Build GRCh38	Deletion	SECTM1 OGFOD3 TEX19 LOC105376790 UTS2R CD7
nsv1067194	Chr.17:82294731 - 82653129 on Build GRCh38	Gain	NARF SECTM1 OGFOD3 TEX19 HEXDC LOC105376790 C17orf62 FOXK2 WDR45B UTS2R CD7
esv2762577	Chr.17:82244836 - 82838431 on Build GRCh38	Gain+Loss	RAB40B SECTM1 OGFOD3 TEX19 FN3K LOC105376790 MIR4525 LOC105376791 UTS2R CD7 LOC101929552 LOC101929511 NARF TBCD FN3KRP CSNK1D HEXDC ZNF750 C17orf62 FOXK2 WDR45B
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	B3GNTL1 RAB40B RAC3 SLC16A3 SIRT7 MIR6787 LOC105376791 LOC101929552 LOC101929511 TBCD ASPSCR1 FN3KRP HEXDC ANAPC11 MCRIP1 SECTM1 PCYT2 PPP1R27 ALYREF ARHGDIA LOC105376790 MIR4525 DUS1L NARF P4HB FOXK2 WDR45B PYCR1 LOC105371944 OGFOD3 DCXR FASN UTS2R METRNL SNORD134 CCDC57 MYADML2 MAFG STRA13 CSNK1D ZNF750 LRRC45 NOTUM TEX19 RFNG FN3K NPB MAFG-AS1 CD7 GPS1 C17orf62

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

protein modifying enzyme

Gene Ontology Categories:

Process(es)

oxidation-reduction process

Function(s)

iron ion binding
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
L-ascorbic acid binding
dioxygenase activity