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See other SCAF1 CNV Assays ›
Gene Symbol
SCAF1
Assay Reference Genome
Location

Chr.19:49656424 on build GRCh38
Cytoband
19q13.33
Assay ID Hs04007968_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 58506

Gene Name:

 SR-related CTD associated factor 1

Gene Aliases:

 SRA1

Location:

 Chr.19:49640483-49658649 on Build GRCh38

Assay Gene Location:

 Within Intron 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SCAF1 NM_021228.2 NP_067051.2
XM_005259122.4 XP_005259179.1
XM_011527194.2 XP_011525496.1
XM_017027083.1 XP_016882572.1
AK024444.1
BC011662.2 AAH11662.2
BC018398.1 AAH18398.1
BC053992.1 AAH53992.1
BQ896877.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss ADM5 CPT1C BCL2L12 RRAS PRRG2 MIR5088 PRMT1 PRR12 NOSIP IRF3 SCAF1
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss ADM5 CPT1C BCL2L12 RRAS PRRG2 MIR5088 PRMT1 PRR12 NOSIP IRF3 SCAF1
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss GFY CABP5 CGB5 SEC1P CD37 CPT1C VRK3 GYS1 SNAR-G1 PIH1D1 SNORD35A FTL RASIP1 C19orf73 PLA2G4C BCAT2 MIR4324 FCGRT AP2A1 HSD17B14 NTF4 CCDC155 MIR150 DHDH NOSIP CARD8 PLEKHA4 SNORD34 SNAR-C2 SNAR-A4 RUVBL2 SNAR-A12 SNAR-A3 CCDC114 PLA2G4C-AS1 TRPM4 SNRNP70 PTOV1-AS2 ALDH16A1 PTOV1-AS1 FAM83E ADM5 SPACA4 AKT1S1 SIGLEC11 KCNA7 DBP SYNGR4 SLC6A16 LMTK3 PRRG2 LHB KCNJ14 SNAR-C3 IRF3 SNAR-B2 SNAR-A5 FUT2 SNAR-C4 LOC105372430 C19orf68 TMEM143 RPL13A NUCB1 SNAR-A10 LOC100287477 LIN7B ZNF114 ATF5 SNAR-A14 SNAR-A1 MIR4751 SPHK2 TBC1D17 SNAR-A7 FGF21 CA11 LOC101928295 SNAR-A6 SNAR-B1 MIR6799 FUT1 BCL2L12 RRAS BSPH1 SNORD35B SNORD33 NUP62 MIR4750 HRC IZUMO1 MIR5088 FLJ26850 SCAF1 PTOV1 SNAR-A13 BAX MIR6798 LOC105447645 CGB2 SNAR-C5 SNORD32A NUCB1-AS1 GRWD1 TEAD2 PPP1R15A PNKP CGB7 SNAR-A2 MIR4749 SNAR-G2 LIG1 MED25 CGB1 RCN3 SNAR-C1 SNAR-A8 CGB8 TULP2 SIGLEC16 LOC101059948 IL4I1 ZNF473 DKKL1 MIR6800 SNAR-A9 RPS11 KDELR1 CGB3 PTH2 CARD8-AS1 SNAR-A11 SLC17A7 PRMT1 PPFIA3 FLT3LG SULT2B1 CYTH2 SNAR-D PRR12 RPL18 GRIN2D NTN5 FUZ EMP3 TSKS MAMSTR ELSPBP1
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain ADM5 CPT1C BCL2L12 RRAS MIR5088 PRMT1 PRR12 IRF3 SCAF1
nsv579909 Chr.19:49649784 - 49659652 on Build GRCh38 Loss IRF3 SCAF1
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion CPT1C PRRG2 IL4I1 MIR5088 MIR6800 IRF3 SCAF1 PTOV1 AP2A1 PRMT1 NOSIP ATF5 PNKP MIR4751 TBC1D17 PRR12 MIR4749 PTOV1-AS2 PTOV1-AS1 MED25 ADM5 AKT1S1 MIR6799 BCL2L12 RRAS FUZ TSKS NUP62 MIR4750
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain ADM5 CPT1C BCL2L12 RRAS PRRG2 MIR5088 PRMT1 PRR12 NOSIP IRF3 SCAF1
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion CPT1C PRRG2 MIR5088 MIR6800 IRF3 SCAF1 RPS11 SNORD35A FCGRT AP2A1 MIR150 PRMT1 NOSIP SNORD32A SNORD34 RPL13A PRR12 PTOV1-AS1 MED25 ADM5 RCN3 MIR6799 BCL2L12 RRAS FUZ SNORD35B TSKS SNORD33
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss BCL2L12 RRAS PRRG2 PRMT1 PRR12 NOSIP IRF3 SCAF1
nsv579908 Chr.19:49645135 - 49663393 on Build GRCh38 Loss IRF3 SCAF1

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