Genomic Map
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Target Gene Details
Entrez Gene ID: | 634 |
Gene Name: | carcinoembryonic antigen related cell adhesion molecule 1 |
Gene Aliases: |
BGP, BGP1, BGPI |
Location: |
Chr.19:42507306-42528509 on Build GRCh38 |
Assay Gene Location: | Within Intron 4 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CEACAM1 | NM_001024912.2 | NP_001020083.1 | ||
| NM_001184813.1 | NP_001171742.1 | |||
| NM_001184815.1 | NP_001171744.1 | |||
| NM_001184816.1 | NP_001171745.1 | |||
| NM_001205344.1 | NP_001192273.1 | |||
| NM_001712.4 | NP_001703.2 | |||
| XM_011527206.1 | XP_011525508.1 | |||
| AK314211.1 | ||||
| AL833584.1 | ||||
| AY766113.1 | AAV34600.1 | |||
| BC014473.1 | AAH14473.1 | |||
| BC024164.1 | AAH24164.1 | |||
| D12502.1 | BAA02063.1 | |||
| D90311.1 | BAA14341.1 | |||
| D90313.1 | BAA14343.1 | |||
| J03858.1 | AAA51826.1 | |||
| M72238.1 | AAA58393.1 | |||
| M76742.1 | AAA57142.1 | |||
| M76743.1 | AAA57143.1 | |||
| M76744.1 | AAA57144.1 | |||
| S71326.1 | AAB31183.1 | |||
| X14831.1 | CAA32940.1 | |||
| X16354.1 | CAA34404.1 | |||
| X16356.1 | CAA34405.1 |
Target Gene Details
Entrez Gene ID: | 100996307 |
Gene Name: | LIPE antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.19:42397148-42652355 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| LIPE-AS1 | NR_073179.1 | |||
| NR_073180.1 | ||||
| AK096849.1 | BAC04875.1 | |||
| AK310497.1 | ||||
| AK311181.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv526186 | Chr.19:42172329 - 42699355 on Build GRCh38 | Gain |
 LIPE
LIPE-AS1
CEACAM8
CXCL17
CIC
CNFN
PAFAH1B3
ERF
DEDD2
MEGF8
ZNF526
MIR8077
CEACAM1
PRR19
POU2F2
TMEM145
GSK3A
LOC101930071
|
| dgv15e196 | Chr.19:42487137 - 43165333 on Build GRCh38 | Deletion |
PSG11
PSG6
CEACAM1
LIPE-AS1
PSG10P
CEACAM8
PSG8
PSG3
PSG7
LOC100289650
PSG2
PSG1
|
| esv2422471 | Chr.19:42228989 - 43165333 on Build GRCh38 | Deletion |
PSG11
PSG6
LIPE
LIPE-AS1
PSG10P
CEACAM8
CXCL17
CIC
CNFN
PSG7
PSG2
PAFAH1B3
ERF
MEGF8
MIR8077
CEACAM1
PRR19
PSG8
PSG3
TMEM145
LOC100289650
GSK3A
LOC101930071
PSG1
|
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Additional Information:
For this assay, SNP(s) [rs79383219] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Gene Ontology Categories:
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