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See other STK11 CNV Assays ›
Gene Symbol
STK11
Assay Reference Genome
Location

Chr.19:1209067 on build GRCh38
Cytoband
19p13.3
Assay ID Hs04012355_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 6794

Gene Name:

 serine/threonine kinase 11

Gene Aliases:

 LKB1, PJS, hLKB1

Location:

 Chr.19:1205799-1228435 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
STK11 NM_000455.4 NP_000446.1
XM_005259617.2 XP_005259674.1
XM_005259618.3 XP_005259675.1
XM_011528209.1 XP_011526511.1
AB209553.1 BAD92790.1
AF035625.1 AAC39527.1
AF217978.1 AAG17221.1
AK314858.1
BC007981.2 AAH07981.1
BC019334.1 AAH19334.1
EF644172.1
KU178339.1
KU178340.1
U63333.1 AAB05809.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1058677 Chr.19:1054061 - 1283189 on Build GRCh38 Loss CBARP POLR2E ABCA7 ARHGAP45 LOC102725180 STK11 GPX4 C19orf24 ATP5D CIRBP-AS1 SBNO2 EFNA2 MIDN CIRBP
dgv136n111 Chr.19:1038223 - 1329640 on Build GRCh38 Deletion CBARP POLR2E ABCA7 ARHGAP45 LOC102725180 STK11 GPX4 C19orf24 ATP5D CIRBP-AS1 SBNO2 EFNA2 MIDN CNN2 CIRBP
nsv9662 Chr.19:893394 - 1317740 on Build GRCh38 Gain CBARP LOC105372235 POLR2E WDR18 ABCA7 R3HDM4 ARID3A RNU6-9 ARHGAP45 LOC102725180 KISS1R STK11 GPX4 C19orf24 ATP5D CIRBP-AS1 GRIN3B SBNO2 EFNA2 TMEM259 MIDN RNU6-2 CNN2 CIRBP
nsv470104 Chr.19:1170446 - 1325151 on Build GRCh38 Loss STK11 CBARP C19orf24 ATP5D CIRBP-AS1 SBNO2 EFNA2 MIDN LOC102725180 CIRBP
nsv1160555 Chr.19:887275 - 1346084 on Build GRCh38 Deletion POLR2E WDR18 ABCA7 ARHGAP45 LOC102725180 STK11 C19orf24 ATP5D CIRBP-AS1 EFNA2 TMEM259 MIDN CIRBP CBARP LOC105372235 R3HDM4 ARID3A RNU6-9 MED16 KISS1R GPX4 GRIN3B SBNO2 RNU6-2 CNN2
esv2717834 Chr.19:1208926 - 1209219 on Build GRCh38 Deletion STK11
nsv953941 Chr.19:1205602 - 1322401 on Build GRCh38 Deletion STK11 CBARP C19orf24 ATP5D CIRBP-AS1 EFNA2 MIDN CIRBP
nsv470103 Chr.19:1086044 - 1325151 on Build GRCh38 Gain CBARP POLR2E ARHGAP45 LOC102725180 STK11 GPX4 C19orf24 ATP5D CIRBP-AS1 SBNO2 EFNA2 MIDN CIRBP
esv2758743 Chr.19:951641 - 1544934 on Build GRCh38 Gain+Loss POLR2E WDR18 ABCA7 ARHGAP45 LOC102725180 STK11 NDUFS7 RPS15 C19orf25 C19orf24 ATP5D CIRBP-AS1 DAZAP1 EFNA2 TMEM259 MIDN GAMT CIRBP CBARP LOC105372235 REEP6 ADAMTSL5 MUM1 ARID3A PCSK4 GPX4 GRIN3B PLK5 SBNO2 APC2 RNU6-2 CNN2

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More Information


Additional Information:

For this assay, SNP(s) [rs73509392] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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