Hs04015505_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48036243 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Intron 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	ELSPBP1 CABP5 PLA2G4C LIG1 PLA2G4C-AS1 C19orf68 BSPH1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	SLC6A16 TRPM4 PLA2G4C LIG1 SNAR-A13 ZNF114 CARD8 FCGRT SNAR-B2 SPHK2 SULT2B1 FAM83E TEAD2 CGB5 SNAR-A9 ALDH16A1 PPFIA3 SNAR-G1 SNAR-A3 IZUMO1 DHDH SNAR-A12 GRWD1 CGB3 MIR150 GRIN2D LOC101059948 MAMSTR LOC101928295 C19orf68 ADM5 PPP1R15A SNAR-A7 EMP3 MIR4324 PRRG2 FTL SLC17A7 CABP5 SIGLEC11 PIH1D1 PRMT1 SNORD35A PTH2 ZNF473 CCDC114 RCN3 GYS1 CARD8-AS1 BCL2L12 GFY SNORD34 NTN5 SNAR-D CCDC155 NUP62 AP2A1 PRR12 SPACA4 TBC1D17 MIR5088 LMTK3 KCNJ14 BAX FLJ26850 MIR4749 PTOV1 BCAT2 HSD17B14 KCNA7 SYNGR4 TULP2 AKT1S1 FGF21 KDELR1 RPL13A TSKS LHB FUT1 SNAR-A14 NOSIP TMEM143 MIR6799 NUCB1-AS1 SNAR-A6 MIR6798 CGB1 SNAR-C5 SNAR-A1 SNAR-B1 PNKP LOC105447645 SNAR-A10 RUVBL2 CGB2 NTF4 LOC100287477 MIR4751 SNAR-A2 SNAR-A4 PLEKHA4 VRK3 SNRNP70 IRF3 FUT2 CPT1C CGB8 SCAF1 RASIP1 MED25 ATF5 SNAR-A11 DBP SNAR-C1 SNAR-C4 CD37 PTOV1-AS1 MIR6800 PTOV1-AS2 DKKL1 PLA2G4C-AS1 FUZ NUCB1 LOC105372430 SNAR-C2 ELSPBP1 SNAR-A5 C19orf73 SEC1P RPL18 MIR4750 IL4I1 CYTH2 SNAR-C3 RPS11 FLT3LG BSPH1 LIN7B SNAR-G2 SNORD35B SNORD32A SNAR-A8 HRC CA11 SIGLEC16 RRAS CGB7 SNORD33
dgv3610n100	Chr.19:48024325 - 48062810 on Build GRCh38	Gain	ELSPBP1 CABP5 PLA2G4C PLA2G4C-AS1
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	ELSPBP1 CABP5 TMEM143 PLA2G4C LIG1 ZNF114 SYNGR4 CCDC114 GRIN2D CARD8-AS1 CARD8 KDELR1 PLA2G4C-AS1 C19orf68 EMP3
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	ELSPBP1 CABP5 PLA2G4C PLA2G4C-AS1
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	ELSPBP1 CABP5 SNAR-A3 SULT2A1 SNAR-A13 LINC01595 SNAR-C3 SNAR-A12 SNAR-C1 SNAR-C4 BSPH1 SNAR-A2 SNAR-C5 SNAR-A1 CRX TPRX1 SNAR-C2
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	ELSPBP1 CABP5 PLA2G4C PLA2G4C-AS1
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
dgv3612n100	Chr.19:48027173 - 48037765 on Build GRCh38	Gain	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	ELSPBP1 CABP5 SNAR-A3 PLA2G4C SULT2A1 SNAR-A13 LINC01595 SNAR-C3 SNAR-A12 SNAR-C1 SNAR-C4 BSPH1 SNAR-A2 SNAR-C5 SNAR-A1 CRX PLA2G4C-AS1 TPRX1 SNAR-C2

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding