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See other SCAF1 CNV Assays ›
Gene Symbol
SCAF1
Assay Reference Genome
Location

Chr.19:49647559 on build GRCh38
Cytoband
19q13.33
Assay ID Hs04016981_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 58506

Gene Name:

 SR-related CTD associated factor 1

Gene Aliases:

 SRA1

Location:

 Chr.19:49640483-49658649 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SCAF1 NM_021228.2 NP_067051.2
XM_005259122.4 XP_005259179.1
XM_011527194.2 XP_011525496.1
XM_017027083.1 XP_016882572.1
AK024444.1
BC011662.2 AAH11662.2
BC053992.1 AAH53992.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss MIR5088 PRR12 BCL2L12 ADM5 SCAF1 NOSIP PRMT1 PRRG2 RRAS IRF3 CPT1C
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss MIR5088 PRR12 BCL2L12 ADM5 SCAF1 NOSIP PRMT1 PRRG2 RRAS IRF3 CPT1C
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss SNAR-A1 SNAR-A6 LMTK3 PPFIA3 SNORD35A MIR6798 GRIN2D SULT2B1 CGB5 MIR4749 FLJ26850 C19orf68 PRRG2 IZUMO1 LOC100287477 TRPM4 SNAR-A13 SEC1P PPP1R15A SNORD33 TSKS MIR4324 MIR4750 BAX DHDH LIG1 FTL LHB PRMT1 RRAS ATF5 SNAR-C2 NUCB1 CGB8 SNORD32A LOC105447645 SNAR-B1 MIR6799 NUP62 SNORD34 CA11 SNAR-A2 GYS1 FCGRT KCNA7 PTOV1-AS1 SNAR-A14 MIR4751 CGB2 SIGLEC11 RUVBL2 CARD8-AS1 SYNGR4 C19orf73 LIN7B RPS11 FLT3LG SNORD35B SNAR-C4 BSPH1 FUT2 LOC105372430 ALDH16A1 SNRNP70 NTN5 ELSPBP1 CABP5 EMP3 CCDC155 BCAT2 TEAD2 CD37 TBC1D17 CGB3 ZNF114 SNAR-A7 SCAF1 DKKL1 NOSIP KCNJ14 PTOV1-AS2 AKT1S1 PNKP SNAR-B2 PTOV1 AP2A1 SNAR-A3 ADM5 SLC6A16 PLA2G4C SNAR-C5 PTH2 ZNF473 NTF4 SNAR-G2 SNAR-D FUZ FAM83E TMEM143 CPT1C CGB1 VRK3 DBP CCDC114 HSD17B14 SNAR-C3 SNAR-A9 CYTH2 PLA2G4C-AS1 SNAR-A5 BCL2L12 PLEKHA4 TULP2 CGB7 SNAR-A11 CARD8 GRWD1 LOC101928295 PRR12 SLC17A7 HRC PIH1D1 SPHK2 MAMSTR MED25 MIR5088 RASIP1 SNAR-A8 RCN3 FUT1 KDELR1 NUCB1-AS1 GFY SNAR-C1 SNAR-A12 FGF21 RPL13A MIR150 LOC101059948 SPACA4 MIR6800 SNAR-A10 SNAR-A4 SNAR-G1 SIGLEC16 RPL18 IL4I1 IRF3
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain MIR5088 PRR12 BCL2L12 ADM5 SCAF1 PRMT1 RRAS IRF3 CPT1C
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion BCL2L12 TBC1D17 ATF5 SCAF1 MIR6799 NOSIP NUP62 PTOV1-AS2 AKT1S1 PRR12 PNKP PTOV1 AP2A1 ADM5 MIR4749 PRRG2 MED25 MIR5088 PTOV1-AS1 FUZ MIR4751 CPT1C TSKS MIR4750 MIR6800 PRMT1 RRAS IL4I1 IRF3
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain MIR5088 PRR12 BCL2L12 ADM5 SCAF1 NOSIP PRMT1 PRRG2 RRAS IRF3 CPT1C
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion BCL2L12 SNORD32A SCAF1 SNORD35A MIR6799 NOSIP PRR12 SNORD34 AP2A1 ADM5 PRRG2 MED25 MIR5088 FCGRT PTOV1-AS1 FUZ RCN3 SNORD33 RPL13A CPT1C MIR150 TSKS RPS11 SNORD35B MIR6800 PRMT1 RRAS IRF3
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss PRR12 BCL2L12 SCAF1 NOSIP PRMT1 PRRG2 RRAS IRF3
nsv579908 Chr.19:49645135 - 49663393 on Build GRCh38 Loss SCAF1 IRF3

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