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See other SCAF1 CNV Assays ›
Gene Symbol
SCAF1
Assay Reference Genome
Location

Chr.19:49643277 on build GRCh38
Cytoband
19q13.33
Assay ID Hs04018635_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 58506

Gene Name:

 SR-related CTD associated factor 1

Gene Aliases:

 SRA1

Location:

 Chr.19:49640483-49658649 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SCAF1 NM_021228.2 NP_067051.2
XM_005259122.4 XP_005259179.1
XM_011527194.2 XP_011525496.1
AK024444.1
BC011662.2 AAH11662.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss CPT1C BCL2L12 PRRG2 SCAF1 RRAS MIR5088 ADM5 PRR12 PRMT1 NOSIP IRF3
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss CPT1C BCL2L12 PRRG2 SCAF1 RRAS MIR5088 ADM5 PRR12 PRMT1 NOSIP IRF3
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss CCDC155 VRK3 TSKS CARD8-AS1 SNORD32A BCAT2 SULT2B1 MIR4751 LMTK3 EMP3 SNORD35B SLC6A16 SNAR-C2 BAX FUT2 CD37 SLC17A7 GRWD1 LHB CGB8 FLJ26850 DHDH PLA2G4C CGB2 NUCB1-AS1 FTL SNORD33 CARD8 BSPH1 ZNF473 SNAR-B2 LOC105372430 SNAR-D KCNJ14 C19orf68 KDELR1 FUZ SNAR-A3 SPACA4 TULP2 NOSIP TRPM4 SNAR-A1 CGB5 CCDC114 DKKL1 PRRG2 RUVBL2 PPFIA3 C19orf73 PTOV1 AP2A1 CPT1C SIGLEC11 BCL2L12 SNAR-A4 NUP62 RCN3 SNRNP70 SNAR-A11 SNAR-B1 RASIP1 SNAR-C4 NUCB1 IL4I1 LIG1 CYTH2 CGB3 ATF5 PTOV1-AS2 ALDH16A1 LIN7B SNAR-A9 NTN5 CGB1 PLEKHA4 MIR4750 MAMSTR SPHK2 MIR6799 TMEM143 SNORD34 DBP PRMT1 IZUMO1 MED25 SNAR-G2 SIGLEC16 FUT1 PPP1R15A KCNA7 HRC HSD17B14 SNAR-A8 TEAD2 GRIN2D SYNGR4 RPL13A SNAR-A13 MIR4749 RPS11 FLT3LG PNKP MIR4324 SNAR-C1 MIR6800 FCGRT ELSPBP1 NTF4 SNAR-A6 PTOV1-AS1 CGB7 SNAR-A7 SNAR-A5 IRF3 SNAR-G1 TBC1D17 LOC101928295 PIH1D1 FAM83E LOC105447645 PRR12 SNAR-A10 SNAR-C5 RPL18 CABP5 SNAR-C3 MIR150 FGF21 MIR6798 MIR5088 SNAR-A12 PTH2 SNORD35A CA11 SNAR-A2 SCAF1 LOC101059948 RRAS GYS1 ADM5 LOC100287477 GFY AKT1S1 SNAR-A14 SEC1P ZNF114 PLA2G4C-AS1
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain CPT1C BCL2L12 SCAF1 RRAS MIR5088 ADM5 PRR12 PRMT1 IRF3
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion TBC1D17 TSKS MIR4750 FUZ MIR6799 PRR12 NOSIP MIR4751 PRRG2 PTOV1 AP2A1 MIR5088 PRMT1 MED25 CPT1C BCL2L12 SCAF1 NUP62 RRAS ADM5 IL4I1 MIR4749 AKT1S1 PNKP MIR6800 ATF5 PTOV1-AS1 PTOV1-AS2 IRF3
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain CPT1C BCL2L12 PRRG2 SCAF1 RRAS MIR5088 ADM5 PRR12 PRMT1 NOSIP IRF3
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion TSKS FUZ SNORD32A MIR6799 PRR12 NOSIP PRRG2 MIR150 SNORD35B AP2A1 MIR5088 SNORD34 PRMT1 MED25 CPT1C BCL2L12 SNORD35A SCAF1 RCN3 RRAS ADM5 RPL13A RPS11 SNORD33 MIR6800 FCGRT PTOV1-AS1 IRF3
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss BCL2L12 PRRG2 SCAF1 RRAS PRR12 PRMT1 NOSIP IRF3

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