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See other SCAF1 CNV Assays ›
Gene Symbol
SCAF1
Assay Reference Genome
Location

Chr.19:49644528 on build GRCh38
Cytoband
19q13.33
Assay ID Hs04020004_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 58506

Gene Name:

 SR-related CTD associated factor 1

Gene Aliases:

 SRA1

Location:

 Chr.19:49640483-49658649 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SCAF1 NM_021228.2 NP_067051.2
XM_005259122.4 XP_005259179.1
XM_011527194.2 XP_011525496.1
AK024444.1
BC011662.2 AAH11662.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss PRMT1 NOSIP PRR12 IRF3 SCAF1 ADM5 BCL2L12 RRAS MIR5088 CPT1C PRRG2
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss PRMT1 NOSIP PRR12 IRF3 SCAF1 ADM5 BCL2L12 RRAS MIR5088 CPT1C PRRG2
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss NUCB1-AS1 CD37 CYTH2 LIN7B PLEKHA4 RPL13A ADM5 SNAR-B1 SNAR-C4 ATF5 SNAR-A3 PPFIA3 CA11 AP2A1 CGB5 FLT3LG PTOV1 NOSIP MIR4750 PLA2G4C PTOV1-AS1 SCAF1 DBP MIR6799 DKKL1 SLC17A7 DHDH TULP2 SNAR-A1 BSPH1 NTN5 LIG1 SNAR-A9 SYNGR4 NUP62 GYS1 PPP1R15A LOC101928295 SNAR-A13 SNAR-A7 NTF4 CGB2 MED25 KCNJ14 SNAR-A6 SNAR-C2 SNORD33 MIR4751 FGF21 ZNF473 EMP3 LOC101059948 SNAR-A12 LOC105447645 CGB3 BCAT2 KCNA7 RASIP1 CGB1 RRAS CCDC155 PTH2 SPACA4 PRR12 SNAR-A5 CGB8 ZNF114 SNAR-A8 HSD17B14 MIR6800 GFY SPHK2 SNORD35B PLA2G4C-AS1 SIGLEC11 RCN3 SNAR-A14 LOC100287477 PTOV1-AS2 SNAR-A10 BCL2L12 SNAR-A4 SNAR-B2 TRPM4 SNAR-G2 PRRG2 FUT2 GRIN2D RPL18 IRF3 LHB SNAR-G1 ALDH16A1 KDELR1 FTL TBC1D17 MAMSTR CCDC114 TEAD2 MIR4324 TMEM143 PIH1D1 SNAR-C3 VRK3 MIR5088 RUVBL2 FLJ26850 SNORD34 SLC6A16 MIR150 GRWD1 C19orf68 SEC1P SNAR-D FUZ FUT1 LMTK3 ELSPBP1 SNAR-C5 RPS11 MIR6798 LOC105372430 CARD8 IZUMO1 PRMT1 SNAR-A11 SNAR-A2 IL4I1 FAM83E SNAR-C1 SIGLEC16 MIR4749 CARD8-AS1 CABP5 SULT2B1 CPT1C AKT1S1 FCGRT NUCB1 SNORD32A HRC C19orf73 BAX PNKP TSKS SNRNP70 CGB7 SNORD35A
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain PRMT1 PRR12 IRF3 SCAF1 ADM5 BCL2L12 RRAS MIR5088 CPT1C
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion MIR6800 MED25 FUZ PTOV1-AS2 MIR4751 ADM5 BCL2L12 ATF5 AP2A1 PRRG2 PRMT1 PTOV1 NOSIP MIR4750 IL4I1 PTOV1-AS1 IRF3 SCAF1 MIR6799 RRAS MIR4749 CPT1C AKT1S1 TBC1D17 PRR12 NUP62 MIR5088 PNKP TSKS
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain PRMT1 NOSIP PRR12 IRF3 SCAF1 ADM5 BCL2L12 RRAS MIR5088 CPT1C PRRG2
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion MIR150 MIR6800 MED25 FUZ SNORD35B RCN3 SNORD33 RPL13A ADM5 BCL2L12 RPS11 AP2A1 PRRG2 PRMT1 NOSIP PTOV1-AS1 IRF3 SCAF1 MIR6799 RRAS CPT1C FCGRT PRR12 SNORD32A MIR5088 SNORD34 TSKS SNORD35A
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss PRMT1 NOSIP PRR12 IRF3 SCAF1 BCL2L12 RRAS PRRG2

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