Hs04020632_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48045222 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	XM_017026992.1			XP_016882481.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	LIG1 ELSPBP1 PLA2G4C C19orf68 PLA2G4C-AS1 BSPH1 CABP5
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	MIR150 SNORD34 ATF5 ZNF473 SNAR-A6 TEAD2 MIR4749 NTN5 LOC101928295 PTH2 SNAR-D ZNF114 AKT1S1 CGB5 SNAR-A13 SNAR-C1 SNAR-C2 FGF21 PRRG2 PPP1R15A PTOV1-AS2 TBC1D17 VRK3 RPL13A SNAR-A4 SNAR-A10 NTF4 SLC17A7 LIG1 SCAF1 SNAR-C5 FAM83E CGB7 NUCB1 MIR4751 MED25 CABP5 SNAR-A9 RCN3 SEC1P LMTK3 FUZ CGB3 GRWD1 RRAS IL4I1 FLJ26850 GRIN2D SNAR-A3 PIH1D1 SNRNP70 KCNJ14 NUP62 SPHK2 PLA2G4C DBP LOC105372430 SNORD32A CARD8-AS1 MIR4324 CPT1C ALDH16A1 CGB2 TULP2 SNAR-A2 PLA2G4C-AS1 SNAR-C3 MIR4750 TSKS NOSIP FUT1 FCGRT ADM5 CCDC155 KDELR1 SNAR-A12 DHDH MIR6800 MAMSTR SNAR-A14 HRC KCNA7 C19orf68 PLEKHA4 SNORD35B LHB CA11 HSD17B14 LOC105447645 SIGLEC11 PTOV1 SIGLEC16 SNORD33 LOC100287477 PTOV1-AS1 SNORD35A FTL SLC6A16 BCL2L12 IZUMO1 LIN7B CD37 GFY DKKL1 IRF3 SNAR-A7 C19orf73 PRMT1 EMP3 PRR12 FUT2 SNAR-C4 FLT3LG AP2A1 RASIP1 RPS11 SNAR-A5 CYTH2 SNAR-G2 CARD8 MIR6799 CGB8 SNAR-A11 SPACA4 BAX CGB1 RPL18 LOC101059948 TMEM143 BSPH1 TRPM4 GYS1 MIR6798 RUVBL2 MIR5088 SNAR-B2 PPFIA3 CCDC114 SNAR-G1 SULT2B1 ELSPBP1 NUCB1-AS1 SNAR-A1 SNAR-B1 SYNGR4 SNAR-A8 PNKP BCAT2
dgv3610n100	Chr.19:48024325 - 48062810 on Build GRCh38	Gain	ELSPBP1 PLA2G4C PLA2G4C-AS1 CABP5
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	PLA2G4C CARD8-AS1 CARD8 CCDC114 KDELR1 LIG1 ELSPBP1 GRIN2D C19orf68 EMP3 TMEM143 SYNGR4 PLA2G4C-AS1 ZNF114 CABP5
nsv1062163	Chr.19:48040339 - 48075632 on Build GRCh38	Gain	PLA2G4C PLA2G4C-AS1 CABP5
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	ELSPBP1 PLA2G4C PLA2G4C-AS1 CABP5
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	ELSPBP1 PLA2G4C PLA2G4C-AS1 CABP5
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	SULT2A1 SNAR-A13 SNAR-C1 SNAR-C2 TPRX1 PLA2G4C SNAR-A12 CRX ELSPBP1 SNAR-C5 SNAR-A1 LINC01595 SNAR-A2 SNAR-A3 PLA2G4C-AS1 SNAR-C3 BSPH1 SNAR-C4 CABP5

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding