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See other ERF CNV Assays ›
Gene Symbol
ERF
Assay Reference Genome
Location

Chr.19:42250796 on build GRCh38
Cytoband
19q13.2
Assay ID Hs04022677_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2077

Gene Name:

 ETS2 repressor factor

Gene Aliases:

 CRS4, PE-2, PE2

Location:

 Chr.19:42247561-42255164 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ERF NM_001301035.1 NP_001287964.1
NM_001308402.1 NP_001295331.1
NM_001312656.1 NP_001299585.1
NM_006494.3 NP_006485.2
XM_017026468.1 1 123 XP_016881957.1
XM_017026469.1 XP_016881958.1
AB209271.1 BAD92508.1
AK297666.1
AK300627.1
AK314278.1
BC022231.1 AAH22231.1
DB246848.1
DC299706.1
DC371332.1
DC407368.1
U15655.1 AAA86686.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv520239 Chr.19:41853387 - 42426852 on Build GRCh38 Loss MIR8077 MIR6797 GSK3A TMEM145 LOC100505585 CD79A ZNF526 ERF PRR19 CIC RABAC1 GRIK5 ARHGEF1 MIR4323 POU2F2 PAFAH1B3 CNFN DEDD2 LIPE LOC100505622 MEGF8 ZNF574 LOC101930071 ATP1A3 LIPE-AS1 RPS19 LOC390937
nsv526186 Chr.19:42172329 - 42699355 on Build GRCh38 Gain CNFN DEDD2 MIR8077 CXCL17 LIPE GSK3A TMEM145 CEACAM8 MEGF8 LOC101930071 ZNF526 ERF PRR19 CIC CEACAM1 LIPE-AS1 POU2F2 PAFAH1B3
nsv833833 Chr.19:42153124 - 42278970 on Build GRCh38 Loss ZNF526 ERF DEDD2 CIC GSK3A POU2F2
nsv1160627 Chr.19:42209979 - 42341899 on Build GRCh38 Deletion ZNF526 ERF DEDD2 PRR19 CIC GSK3A TMEM145 MEGF8 PAFAH1B3
nsv953583 Chr.19:42242549 - 42312148 on Build GRCh38 Deletion ERF PRR19 CIC GSK3A PAFAH1B3
nsv522854 Chr.19:41613927 - 42426852 on Build GRCh38 Gain MIR8077 MIR6797 GSK3A TMEM145 LOC100505585 CD79A ZNF526 ERF PRR19 CIC RABAC1 GRIK5 ARHGEF1 MIR4323 POU2F2 PAFAH1B3 DMRTC2 CEACAM3 CNFN DEDD2 CEACAM7 LIPE CEACAM6 CEACAM4 LOC100505622 LYPD4 MEGF8 ZNF574 CEACAM5 LOC101930071 ATP1A3 LIPE-AS1 RPS19 LOC390937
nsv833834 Chr.19:42232292 - 42330875 on Build GRCh38 Loss ERF PRR19 CIC GSK3A TMEM145 MEGF8 PAFAH1B3
esv2422471 Chr.19:42228989 - 43165333 on Build GRCh38 Deletion PSG8 CNFN LOC100289650 PSG1 MIR8077 PSG2 CXCL17 LIPE GSK3A PSG6 TMEM145 CEACAM8 MEGF8 LOC101930071 ERF PRR19 CIC PSG7 PSG11 CEACAM1 LIPE-AS1 PSG3 PSG10P PAFAH1B3

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More Information


Additional Information:

For this assay, SNP(s) [rs111862714] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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